Top 10 genes with highest correlation to Rv3651/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3283/sseA | (cc=0.6723) | info on Rv3283/sseA |
| Rv0406c/- | (cc=0.6591) | info on Rv0406c/- |
| Rv2681/- | (cc=0.6532) | info on Rv2681/- |
| Rv0561c/- | (cc=0.6476) | info on Rv0561c/- |
| Rv2564/glnQ | (cc=0.6365) | info on Rv2564/glnQ |
| Rv0985c/mscL | (cc=0.6364) | info on Rv0985c/mscL |
| Rv2563/- | (cc=0.6359) | info on Rv2563/- |
| Rv1657/argR | (cc=0.6184) | info on Rv1657/argR |
| Rv2669/- | (cc=0.6024) | info on Rv2669/- |
| Rv3607c/folB | (cc=0.5953) | info on Rv3607c/folB |
Correlation of Rv3651/- with Rv0406c/-
Normalized LFCs for Rv3651/-:
(description and provenance of datasets)
| Rv3651/- | Rv0406c/- | |
| Fe_supp_jason_reseq | 0.923 | 1.271 |
| low_pH_jason_reseq | -0.979 | -0.669 |
| NO_jason_reseq | -2.625 | -2.746 |
| B6_jason_reseq | -0.496 | -0.444 |
| MHCII_jason_reseq | -0.503 | 0.577 |
| Isoniazid02 | -0.528 | 0.662 |
| Rifampicin4 | -1.584 | -1.034 |
| Ethambutol3 | -0.64 | 0.355 |
| Meropenem3 | 1.677 | 0.512 |
| Vancomycin16 | -0.828 | 0.801 |
| Rv2680_day32 | -0.883 | -1.486 |
| H37Rv_KO_MarP | 0.674 | -1.834 |
| hypoxia_3wks | -2.333 | -1.376 |
| hypoxia_6wks | -1.894 | -1.56 |
| glycerol | 2.73 | 0.762 |
| cholesterol | 1.434 | 0.333 |
| AJ | 0.918 | -1.55 |
| Bibs02 | 0.525 | -0.538 |
| Bibs02c | 1.682 | 0.203 |
| BL6 | -2.121 | -2.306 |
| BL6a | 0.63 | -0.913 |
| BXD01 | -1.751 | -1.496 |
| BXD010 | -2.715 | -2.642 |
| BXD011 | -2.35 | -1.921 |
| BXD03 | -1.959 | -2.456 |
| BXD04 | -2.187 | -2.246 |
| BXD05 | -2.282 | -3.033 |
| BXD06 | -2.463 | -2.285 |
| BXD07 | -2.348 | -2.857 |
| BXD08 | -1.202 | -1.232 |
| BXD09 | -2.036 | -2.371 |
| CAST | 0.297 | -2.002 |
| CCcont | -0.318 | -0.757 |
| DS01 | 2.156 | 1.316 |
| DS02 | 2.046 | 1.18 |
| DS04 | 1.941 | 1.31 |
| DS0c | 2.549 | 1.139 |
| GP01 | 0.873 | -2.109 |
| GP02 | -0.752 | -1.808 |
| GP0c | -0.255 | -1.088 |
| NOD | 1.206 | -1.246 |
| NZO | -0.172 | -2.349 |
| PWK | 0.18 | -1.384 |
| H37Rv_KO_CtpC | -0.459 | -0.785 |
| H37Rv_KO_CtpD | -0.358 | -1.885 |
| H37Rv_KO_Rv1272 | -2.989 | -1.52 |
| H37Rv_KO_SugABC | -1.491 | -2.115 |
| H37Rv_KO_MbtN | -1.493 | -2.24 |
| Trans05 | -2.769 | -1.893 |
| macrophage_unactivated | -0.35 | 0.496 |
| IL1 | -1.284 | -1.026 |
| Rapamycin | -2.047 | -1.062 |
| Tcell | -1.906 | 0.648 |
| GMCSF | -0.958 | 0.182 |
| IFNab | -1.533 | -0.296 |
| IFNg | -1.783 | -0.543 |
| IFNg_GMCSF1 | 0.0 | -0.638 |
| Rv1432_day32 | -0.632 | -1.724 |
| Rv1565c_day32 | 0.706 | 1.02 |
| secA2_input | 0.736 | 0.498 |
| delta_Rv3594 | 0.938 | -0.854 |
| delta_Rv3717 | 0.384 | -1.193 |
| delta_Rv3811 | -0.129 | -2.061 |
| delta_Rv0954 | 2.766 | 1.234 |
| PonA1 | 0.77 | 0.613 |
| EccD1_KO | 0.77 | 1.779 |
| EspI_KO | 1.243 | 0.299 |
| PE35_KO | 2.051 | 1.639 |
| PPE68_KO | 0.749 | 1.645 |
| glycerol2 | -0.588 | -2.404 |
| lignocerate | -0.605 | -1.577 |
| oleate | -0.819 | -3.281 |
| phosphatidylcholine | -0.296 | -1.172 |
| acetate | 0.326 | 0.101 |
| glucAc | -0.686 | -0.419 |
| Rv0950ko | -0.217 | 0.748 |
| Rv1096ko | 1.279 | 0.591 |
| Rv3684ko | 1.3 | -0.675 |
| delta_otsA_trehalose | 1.864 | 0.133 |