Top 10 genes with highest correlation to Rv3528c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3210c/- | (cc=0.7172) | info on Rv3210c/- |
| Rv0642c/mmaA4 | (cc=0.6187) | info on Rv0642c/mmaA4 |
| Rv1500/- | (cc=0.618) | info on Rv1500/- |
| Rv1925/fadD31 | (cc=0.6117) | info on Rv1925/fadD31 |
| Rv0055/rpsR1 | (cc=0.6065) | info on Rv0055/rpsR1 |
| Rv2544/lppB | (cc=0.6054) | info on Rv2544/lppB |
| Rv3524/- | (cc=0.6051) | info on Rv3524/- |
| Rv3152/nuoH | (cc=0.604) | info on Rv3152/nuoH |
| Rv2548/vapC19 | (cc=0.599) | info on Rv2548/vapC19 |
| Rv1724c/- | (cc=0.5811) | info on Rv1724c/- |
Correlation of Rv3528c/- with Rv1925/fadD31
Normalized LFCs for Rv3528c/-:
(description and provenance of datasets)
| Rv3528c/- | Rv1925/fadD31 | |
| Fe_supp_jason_reseq | 0.838 | 1.332 |
| low_pH_jason_reseq | -0.607 | 1.553 |
| NO_jason_reseq | 0.137 | 0.291 |
| B6_jason_reseq | 0.547 | 2.287 |
| MHCII_jason_reseq | 0.445 | 0.401 |
| Isoniazid02 | -0.068 | -0.943 |
| Rifampicin4 | 0.0 | -2.166 |
| Ethambutol3 | -0.449 | -0.22 |
| Meropenem3 | -0.442 | -0.709 |
| Vancomycin16 | 0.353 | -5.027 |
| Rv2680_day32 | -0.186 | 1.518 |
| H37Rv_KO_MarP | -0.054 | 0.454 |
| hypoxia_3wks | -0.833 | -3.246 |
| hypoxia_6wks | 0.967 | 1.942 |
| glycerol | 0.102 | 0.875 |
| cholesterol | -0.652 | 0.805 |
| AJ | 1.356 | 0.555 |
| Bibs02 | 0.956 | 0.619 |
| Bibs02c | 0.812 | 0.762 |
| BL6 | 0.97 | 2.426 |
| BL6a | 2.408 | 3.626 |
| BXD01 | 1.562 | 3.932 |
| BXD010 | 1.676 | 3.693 |
| BXD011 | 1.705 | 5.692 |
| BXD03 | 2.078 | 2.496 |
| BXD04 | 1.619 | 4.113 |
| BXD05 | 2.306 | 3.297 |
| BXD06 | 1.881 | 4.596 |
| BXD07 | 2.076 | 4.152 |
| BXD08 | 1.617 | 4.38 |
| BXD09 | 1.922 | 4.226 |
| CAST | 0.117 | 1.168 |
| CCcont | 1.492 | 0.689 |
| DS01 | 0.551 | 0.773 |
| DS02 | 1.459 | 0.803 |
| DS04 | 1.248 | 1.334 |
| DS0c | -0.809 | -0.016 |
| GP01 | 1.216 | 2.856 |
| GP02 | -0.141 | 3.646 |
| GP0c | 0.0 | 2.237 |
| NOD | -0.12 | -0.57 |
| NZO | -0.465 | 1.357 |
| PWK | 0.615 | 3.684 |
| H37Rv_KO_CtpC | 2.026 | 1.444 |
| H37Rv_KO_CtpD | 0.662 | -0.219 |
| H37Rv_KO_Rv1272 | 2.217 | 3.107 |
| H37Rv_KO_SugABC | 1.188 | 1.881 |
| H37Rv_KO_MbtN | 1.632 | 4.596 |
| Trans05 | 0.725 | 3.83 |
| macrophage_unactivated | 0.89 | -3.608 |
| IL1 | 0.243 | -0.217 |
| Rapamycin | 0.0 | -0.697 |
| Tcell | 0.762 | 0.375 |
| GMCSF | 0.145 | -3.601 |
| IFNab | -0.088 | 0.511 |
| IFNg | 0.754 | -0.569 |
| IFNg_GMCSF1 | -0.273 | -0.946 |
| Rv1432_day32 | -0.168 | 0.554 |
| Rv1565c_day32 | -0.357 | -3.911 |
| secA2_input | 0.377 | 0.009 |
| delta_Rv3594 | 0.731 | 0.422 |
| delta_Rv3717 | -0.135 | 2.923 |
| delta_Rv3811 | 0.219 | 1.325 |
| delta_Rv0954 | -0.211 | -1.804 |
| PonA1 | -0.645 | -2.193 |
| EccD1_KO | -1.085 | -2.273 |
| EspI_KO | -0.713 | -2.313 |
| PE35_KO | -0.403 | -2.654 |
| PPE68_KO | -0.326 | -2.4 |
| glycerol2 | 0.598 | 0.198 |
| lignocerate | 1.391 | -0.038 |
| oleate | 0.136 | -1.096 |
| phosphatidylcholine | 0.933 | 0.342 |
| acetate | 0.999 | -0.261 |
| glucAc | 1.377 | 0.266 |
| Rv0950ko | 0.742 | -1.248 |
| Rv1096ko | 0.48 | -1.553 |
| Rv3684ko | 0.318 | 0.527 |
| delta_otsA_trehalose | -1.179 | -0.149 |