Top 10 genes with highest correlation to Rv3528c/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv3210c/- | (cc=0.7172) | info on Rv3210c/- |
Rv0642c/mmaA4 | (cc=0.6187) | info on Rv0642c/mmaA4 |
Rv1500/- | (cc=0.618) | info on Rv1500/- |
Rv1925/fadD31 | (cc=0.6117) | info on Rv1925/fadD31 |
Rv0055/rpsR1 | (cc=0.6065) | info on Rv0055/rpsR1 |
Rv2544/lppB | (cc=0.6054) | info on Rv2544/lppB |
Rv3524/- | (cc=0.6051) | info on Rv3524/- |
Rv3152/nuoH | (cc=0.604) | info on Rv3152/nuoH |
Rv2548/vapC19 | (cc=0.599) | info on Rv2548/vapC19 |
Rv1724c/- | (cc=0.5811) | info on Rv1724c/- |
Correlation of Rv3528c/- with Rv2548/vapC19
Normalized LFCs for Rv3528c/-:
(description and provenance of datasets)
Rv3528c/- | Rv2548/vapC19 | |
Fe_supp_jason_reseq | 0.838 | 0.63 |
low_pH_jason_reseq | -0.607 | -0.087 |
NO_jason_reseq | 0.137 | -1.124 |
B6_jason_reseq | 0.547 | -3.129 |
MHCII_jason_reseq | 0.445 | -1.396 |
Isoniazid02 | -0.068 | 0.499 |
Rifampicin4 | 0.0 | -0.403 |
Ethambutol3 | -0.449 | 0.621 |
Meropenem3 | -0.442 | 0.034 |
Vancomycin16 | 0.353 | 0.334 |
Rv2680_day32 | -0.186 | 0.017 |
H37Rv_KO_MarP | -0.054 | -0.22 |
hypoxia_3wks | -0.833 | 0.0 |
hypoxia_6wks | 0.967 | 0.0 |
glycerol | 0.102 | -0.961 |
cholesterol | -0.652 | -0.811 |
AJ | 1.356 | -0.677 |
Bibs02 | 0.956 | 2.277 |
Bibs02c | 0.812 | 0.643 |
BL6 | 0.97 | 0.661 |
BL6a | 2.408 | 2.307 |
BXD01 | 1.562 | 1.936 |
BXD010 | 1.676 | 1.95 |
BXD011 | 1.705 | 2.089 |
BXD03 | 2.078 | 1.217 |
BXD04 | 1.619 | 1.65 |
BXD05 | 2.306 | 2.049 |
BXD06 | 1.881 | 1.943 |
BXD07 | 2.076 | 2.508 |
BXD08 | 1.617 | 2.196 |
BXD09 | 1.922 | 2.123 |
CAST | 0.117 | -0.752 |
CCcont | 1.492 | 1.764 |
DS01 | 0.551 | 0.388 |
DS02 | 1.459 | 0.54 |
DS04 | 1.248 | 2.02 |
DS0c | -0.809 | -1.411 |
GP01 | 1.216 | 1.199 |
GP02 | -0.141 | -0.466 |
GP0c | 0.0 | -0.425 |
NOD | -0.12 | -0.895 |
NZO | -0.465 | -1.394 |
PWK | 0.615 | -0.324 |
H37Rv_KO_CtpC | 2.026 | 1.218 |
H37Rv_KO_CtpD | 0.662 | 2.7 |
H37Rv_KO_Rv1272 | 2.217 | 0.406 |
H37Rv_KO_SugABC | 1.188 | 0.73 |
H37Rv_KO_MbtN | 1.632 | 0.076 |
Trans05 | 0.725 | 1.696 |
macrophage_unactivated | 0.89 | 0.953 |
IL1 | 0.243 | 0.575 |
Rapamycin | 0.0 | -0.654 |
Tcell | 0.762 | 0.43 |
GMCSF | 0.145 | 0.349 |
IFNab | -0.088 | -0.06 |
IFNg | 0.754 | -0.569 |
IFNg_GMCSF1 | -0.273 | -0.223 |
Rv1432_day32 | -0.168 | 0.516 |
Rv1565c_day32 | -0.357 | 1.193 |
secA2_input | 0.377 | -1.368 |
delta_Rv3594 | 0.731 | 0.376 |
delta_Rv3717 | -0.135 | 0.92 |
delta_Rv3811 | 0.219 | 0.526 |
delta_Rv0954 | -0.211 | -0.634 |
PonA1 | -0.645 | -1.604 |
EccD1_KO | -1.085 | -0.622 |
EspI_KO | -0.713 | -0.761 |
PE35_KO | -0.403 | -0.303 |
PPE68_KO | -0.326 | -0.218 |
glycerol2 | 0.598 | 0.388 |
lignocerate | 1.391 | 0.218 |
oleate | 0.136 | 0.302 |
phosphatidylcholine | 0.933 | 0.515 |
acetate | 0.999 | 0.148 |
glucAc | 1.377 | -0.355 |
Rv0950ko | 0.742 | -1.447 |
Rv1096ko | 0.48 | -1.176 |
Rv3684ko | 0.318 | -1.402 |
delta_otsA_trehalose | -1.179 | 0.134 |