Top 10 genes with highest correlation to Rv3528c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3210c/- | (cc=0.7172) | info on Rv3210c/- |
| Rv0642c/mmaA4 | (cc=0.6187) | info on Rv0642c/mmaA4 |
| Rv1500/- | (cc=0.618) | info on Rv1500/- |
| Rv1925/fadD31 | (cc=0.6117) | info on Rv1925/fadD31 |
| Rv0055/rpsR1 | (cc=0.6065) | info on Rv0055/rpsR1 |
| Rv2544/lppB | (cc=0.6054) | info on Rv2544/lppB |
| Rv3524/- | (cc=0.6051) | info on Rv3524/- |
| Rv3152/nuoH | (cc=0.604) | info on Rv3152/nuoH |
| Rv2548/vapC19 | (cc=0.599) | info on Rv2548/vapC19 |
| Rv1724c/- | (cc=0.5811) | info on Rv1724c/- |
Correlation of Rv3528c/- with Rv0642c/mmaA4
Normalized LFCs for Rv3528c/-:
(description and provenance of datasets)
| Rv3528c/- | Rv0642c/mmaA4 | |
| Fe_supp_jason_reseq | 0.838 | 1.547 |
| low_pH_jason_reseq | -0.607 | 2.202 |
| NO_jason_reseq | 0.137 | 2.678 |
| B6_jason_reseq | 0.547 | -2.886 |
| MHCII_jason_reseq | 0.445 | -1.687 |
| Isoniazid02 | -0.068 | -1.333 |
| Rifampicin4 | 0.0 | -1.565 |
| Ethambutol3 | -0.449 | -2.112 |
| Meropenem3 | -0.442 | -1.815 |
| Vancomycin16 | 0.353 | -6.0 |
| Rv2680_day32 | -0.186 | -0.359 |
| H37Rv_KO_MarP | -0.054 | 0.571 |
| hypoxia_3wks | -0.833 | -0.937 |
| hypoxia_6wks | 0.967 | 3.548 |
| glycerol | 0.102 | 1.556 |
| cholesterol | -0.652 | -0.145 |
| AJ | 1.356 | 0.585 |
| Bibs02 | 0.956 | 0.717 |
| Bibs02c | 0.812 | 2.877 |
| BL6 | 0.97 | 2.544 |
| BL6a | 2.408 | 3.946 |
| BXD01 | 1.562 | 4.224 |
| BXD010 | 1.676 | 4.186 |
| BXD011 | 1.705 | 6.0 |
| BXD03 | 2.078 | 4.026 |
| BXD04 | 1.619 | 3.598 |
| BXD05 | 2.306 | 4.7 |
| BXD06 | 1.881 | 5.627 |
| BXD07 | 2.076 | 4.784 |
| BXD08 | 1.617 | 5.896 |
| BXD09 | 1.922 | 4.223 |
| CAST | 0.117 | -0.23 |
| CCcont | 1.492 | 5.608 |
| DS01 | 0.551 | -0.236 |
| DS02 | 1.459 | -0.217 |
| DS04 | 1.248 | 2.617 |
| DS0c | -0.809 | -0.217 |
| GP01 | 1.216 | 6.0 |
| GP02 | -0.141 | 3.274 |
| GP0c | 0.0 | 6.0 |
| NOD | -0.12 | 0.0 |
| NZO | -0.465 | -0.199 |
| PWK | 0.615 | 0.342 |
| H37Rv_KO_CtpC | 2.026 | 4.153 |
| H37Rv_KO_CtpD | 0.662 | 1.805 |
| H37Rv_KO_Rv1272 | 2.217 | 4.035 |
| H37Rv_KO_SugABC | 1.188 | 1.362 |
| H37Rv_KO_MbtN | 1.632 | 6.0 |
| Trans05 | 0.725 | 4.713 |
| macrophage_unactivated | 0.89 | -3.595 |
| IL1 | 0.243 | 0.297 |
| Rapamycin | 0.0 | -0.706 |
| Tcell | 0.762 | -0.124 |
| GMCSF | 0.145 | -3.126 |
| IFNab | -0.088 | -0.883 |
| IFNg | 0.754 | -4.153 |
| IFNg_GMCSF1 | -0.273 | -5.477 |
| Rv1432_day32 | -0.168 | -0.98 |
| Rv1565c_day32 | -0.357 | -1.21 |
| secA2_input | 0.377 | 0.424 |
| delta_Rv3594 | 0.731 | 1.768 |
| delta_Rv3717 | -0.135 | 3.284 |
| delta_Rv3811 | 0.219 | 1.646 |
| delta_Rv0954 | -0.211 | -2.158 |
| PonA1 | -0.645 | -6.0 |
| EccD1_KO | -1.085 | -6.0 |
| EspI_KO | -0.713 | -6.0 |
| PE35_KO | -0.403 | -6.0 |
| PPE68_KO | -0.326 | -6.0 |
| glycerol2 | 0.598 | -1.684 |
| lignocerate | 1.391 | -1.464 |
| oleate | 0.136 | -1.167 |
| phosphatidylcholine | 0.933 | -1.683 |
| acetate | 0.999 | -1.561 |
| glucAc | 1.377 | -0.451 |
| Rv0950ko | 0.742 | -3.98 |
| Rv1096ko | 0.48 | -3.906 |
| Rv3684ko | 0.318 | -1.628 |
| delta_otsA_trehalose | -1.179 | -0.595 |