Top 10 genes with highest correlation to Rv3528c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3210c/- | (cc=0.7172) | info on Rv3210c/- |
| Rv0642c/mmaA4 | (cc=0.6187) | info on Rv0642c/mmaA4 |
| Rv1500/- | (cc=0.618) | info on Rv1500/- |
| Rv1925/fadD31 | (cc=0.6117) | info on Rv1925/fadD31 |
| Rv0055/rpsR1 | (cc=0.6065) | info on Rv0055/rpsR1 |
| Rv2544/lppB | (cc=0.6054) | info on Rv2544/lppB |
| Rv3524/- | (cc=0.6051) | info on Rv3524/- |
| Rv3152/nuoH | (cc=0.604) | info on Rv3152/nuoH |
| Rv2548/vapC19 | (cc=0.599) | info on Rv2548/vapC19 |
| Rv1724c/- | (cc=0.5811) | info on Rv1724c/- |
Correlation of Rv3528c/- with Rv0055/rpsR1
Normalized LFCs for Rv3528c/-:
(description and provenance of datasets)
| Rv3528c/- | Rv0055/rpsR1 | |
| Fe_supp_jason_reseq | 0.838 | -1.37 |
| low_pH_jason_reseq | -0.607 | 3.369 |
| NO_jason_reseq | 0.137 | 2.57 |
| B6_jason_reseq | 0.547 | -0.657 |
| MHCII_jason_reseq | 0.445 | 1.143 |
| Isoniazid02 | -0.068 | 2.663 |
| Rifampicin4 | 0.0 | 0.902 |
| Ethambutol3 | -0.449 | -0.441 |
| Meropenem3 | -0.442 | 0.763 |
| Vancomycin16 | 0.353 | -0.294 |
| Rv2680_day32 | -0.186 | 0.109 |
| H37Rv_KO_MarP | -0.054 | -1.325 |
| hypoxia_3wks | -0.833 | -0.678 |
| hypoxia_6wks | 0.967 | 0.084 |
| glycerol | 0.102 | 0.97 |
| cholesterol | -0.652 | -0.276 |
| AJ | 1.356 | 0.983 |
| Bibs02 | 0.956 | 0.0 |
| Bibs02c | 0.812 | 0.336 |
| BL6 | 0.97 | 3.526 |
| BL6a | 2.408 | 3.297 |
| BXD01 | 1.562 | 5.013 |
| BXD010 | 1.676 | 4.197 |
| BXD011 | 1.705 | 5.786 |
| BXD03 | 2.078 | 3.889 |
| BXD04 | 1.619 | 6.0 |
| BXD05 | 2.306 | 4.896 |
| BXD06 | 1.881 | 4.527 |
| BXD07 | 2.076 | 4.203 |
| BXD08 | 1.617 | 5.838 |
| BXD09 | 1.922 | 4.442 |
| CAST | 0.117 | 3.287 |
| CCcont | 1.492 | 3.633 |
| DS01 | 0.551 | 1.381 |
| DS02 | 1.459 | 0.181 |
| DS04 | 1.248 | -0.177 |
| DS0c | -0.809 | 0.0 |
| GP01 | 1.216 | -0.188 |
| GP02 | -0.141 | 0.0 |
| GP0c | 0.0 | -0.248 |
| NOD | -0.12 | 3.817 |
| NZO | -0.465 | -0.182 |
| PWK | 0.615 | 3.083 |
| H37Rv_KO_CtpC | 2.026 | 1.611 |
| H37Rv_KO_CtpD | 0.662 | 1.594 |
| H37Rv_KO_Rv1272 | 2.217 | 2.661 |
| H37Rv_KO_SugABC | 1.188 | -0.189 |
| H37Rv_KO_MbtN | 1.632 | 1.153 |
| Trans05 | 0.725 | 3.074 |
| macrophage_unactivated | 0.89 | 0.0 |
| IL1 | 0.243 | -0.54 |
| Rapamycin | 0.0 | -0.077 |
| Tcell | 0.762 | 1.717 |
| GMCSF | 0.145 | -1.677 |
| IFNab | -0.088 | -0.076 |
| IFNg | 0.754 | -1.31 |
| IFNg_GMCSF1 | -0.273 | -2.916 |
| Rv1432_day32 | -0.168 | 0.0 |
| Rv1565c_day32 | -0.357 | -0.415 |
| secA2_input | 0.377 | 0.997 |
| delta_Rv3594 | 0.731 | -0.812 |
| delta_Rv3717 | -0.135 | -4.252 |
| delta_Rv3811 | 0.219 | -0.106 |
| delta_Rv0954 | -0.211 | -4.366 |
| PonA1 | -0.645 | -1.721 |
| EccD1_KO | -1.085 | -2.578 |
| EspI_KO | -0.713 | 0.0 |
| PE35_KO | -0.403 | 0.134 |
| PPE68_KO | -0.326 | 0.941 |
| glycerol2 | 0.598 | 2.948 |
| lignocerate | 1.391 | 3.955 |
| oleate | 0.136 | -1.418 |
| phosphatidylcholine | 0.933 | 3.751 |
| acetate | 0.999 | 4.357 |
| glucAc | 1.377 | 3.813 |
| Rv0950ko | 0.742 | -0.944 |
| Rv1096ko | 0.48 | -1.08 |
| Rv3684ko | 0.318 | 2.391 |
| delta_otsA_trehalose | -1.179 | 0.0 |