Top 10 genes with highest correlation to Rv3528c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3210c/- | (cc=0.7172) | info on Rv3210c/- |
| Rv0642c/mmaA4 | (cc=0.6187) | info on Rv0642c/mmaA4 |
| Rv1500/- | (cc=0.618) | info on Rv1500/- |
| Rv1925/fadD31 | (cc=0.6117) | info on Rv1925/fadD31 |
| Rv0055/rpsR1 | (cc=0.6065) | info on Rv0055/rpsR1 |
| Rv2544/lppB | (cc=0.6054) | info on Rv2544/lppB |
| Rv3524/- | (cc=0.6051) | info on Rv3524/- |
| Rv3152/nuoH | (cc=0.604) | info on Rv3152/nuoH |
| Rv2548/vapC19 | (cc=0.599) | info on Rv2548/vapC19 |
| Rv1724c/- | (cc=0.5811) | info on Rv1724c/- |
Correlation of Rv3528c/- with Rv3210c/-
Normalized LFCs for Rv3528c/-:
(description and provenance of datasets)
| Rv3528c/- | Rv3210c/- | |
| Fe_supp_jason_reseq | 0.838 | 2.062 |
| low_pH_jason_reseq | -0.607 | -3.853 |
| NO_jason_reseq | 0.137 | -2.056 |
| B6_jason_reseq | 0.547 | -1.674 |
| MHCII_jason_reseq | 0.445 | -2.452 |
| Isoniazid02 | -0.068 | -0.351 |
| Rifampicin4 | 0.0 | -0.311 |
| Ethambutol3 | -0.449 | 0.0 |
| Meropenem3 | -0.442 | 0.0 |
| Vancomycin16 | 0.353 | -0.305 |
| Rv2680_day32 | -0.186 | 0.617 |
| H37Rv_KO_MarP | -0.054 | -3.844 |
| hypoxia_3wks | -0.833 | -5.383 |
| hypoxia_6wks | 0.967 | -2.533 |
| glycerol | 0.102 | -0.709 |
| cholesterol | -0.652 | -0.509 |
| AJ | 1.356 | -0.18 |
| Bibs02 | 0.956 | 0.132 |
| Bibs02c | 0.812 | -0.336 |
| BL6 | 0.97 | 2.786 |
| BL6a | 2.408 | 3.965 |
| BXD01 | 1.562 | 4.097 |
| BXD010 | 1.676 | 4.494 |
| BXD011 | 1.705 | 4.043 |
| BXD03 | 2.078 | 2.532 |
| BXD04 | 1.619 | 4.283 |
| BXD05 | 2.306 | 3.297 |
| BXD06 | 1.881 | 4.797 |
| BXD07 | 2.076 | 4.33 |
| BXD08 | 1.617 | 4.103 |
| BXD09 | 1.922 | 4.378 |
| CAST | 0.117 | -0.809 |
| CCcont | 1.492 | 4.389 |
| DS01 | 0.551 | 0.0 |
| DS02 | 1.459 | -0.548 |
| DS04 | 1.248 | 1.97 |
| DS0c | -0.809 | -0.168 |
| GP01 | 1.216 | -0.077 |
| GP02 | -0.141 | 0.116 |
| GP0c | 0.0 | 1.73 |
| NOD | -0.12 | -0.789 |
| NZO | -0.465 | -0.701 |
| PWK | 0.615 | -0.689 |
| H37Rv_KO_CtpC | 2.026 | 1.944 |
| H37Rv_KO_CtpD | 0.662 | 1.545 |
| H37Rv_KO_Rv1272 | 2.217 | 2.512 |
| H37Rv_KO_SugABC | 1.188 | 3.415 |
| H37Rv_KO_MbtN | 1.632 | 5.206 |
| Trans05 | 0.725 | 3.053 |
| macrophage_unactivated | 0.89 | -0.716 |
| IL1 | 0.243 | 0.341 |
| Rapamycin | 0.0 | 0.0 |
| Tcell | 0.762 | -1.619 |
| GMCSF | 0.145 | 0.721 |
| IFNab | -0.088 | 2.283 |
| IFNg | 0.754 | 1.109 |
| IFNg_GMCSF1 | -0.273 | -0.396 |
| Rv1432_day32 | -0.168 | -1.71 |
| Rv1565c_day32 | -0.357 | -3.884 |
| secA2_input | 0.377 | 1.565 |
| delta_Rv3594 | 0.731 | 0.153 |
| delta_Rv3717 | -0.135 | 0.946 |
| delta_Rv3811 | 0.219 | 0.913 |
| delta_Rv0954 | -0.211 | -3.66 |
| PonA1 | -0.645 | -5.488 |
| EccD1_KO | -1.085 | -2.457 |
| EspI_KO | -0.713 | -2.073 |
| PE35_KO | -0.403 | -3.104 |
| PPE68_KO | -0.326 | -3.161 |
| glycerol2 | 0.598 | 0.82 |
| lignocerate | 1.391 | 0.0 |
| oleate | 0.136 | 0.0 |
| phosphatidylcholine | 0.933 | 0.0 |
| acetate | 0.999 | 0.0 |
| glucAc | 1.377 | 0.392 |
| Rv0950ko | 0.742 | -0.214 |
| Rv1096ko | 0.48 | 0.178 |
| Rv3684ko | 0.318 | 0.635 |
| delta_otsA_trehalose | -1.179 | 0.0 |