Top 10 genes with highest correlation to Rv3197/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1568/bioA | (cc=0.7512) | info on Rv1568/bioA |
| Rv0485/- | (cc=0.7483) | info on Rv0485/- |
| Rv3616c/espA | (cc=0.7336) | info on Rv3616c/espA |
| Rv3057c/- | (cc=0.7309) | info on Rv3057c/- |
| Rv3869/eccB1 | (cc=0.7283) | info on Rv3869/eccB1 |
| Rv1493/mutB | (cc=0.7252) | info on Rv1493/mutB |
| Rv3870/eccCa1 | (cc=0.7239) | info on Rv3870/eccCa1 |
| Rv1590/- | (cc=0.7218) | info on Rv1590/- |
| Rv1569/bioF1 | (cc=0.721) | info on Rv1569/bioF1 |
| Rv3551/- | (cc=0.7199) | info on Rv3551/- |
Correlation of Rv3197/- with Rv3869/eccB1
Normalized LFCs for Rv3197/-:
(description and provenance of datasets)
| Rv3197/- | Rv3869/eccB1 | |
| Fe_supp_jason_reseq | 0.865 | -0.595 |
| low_pH_jason_reseq | -1.295 | -1.504 |
| NO_jason_reseq | 0.407 | -0.517 |
| B6_jason_reseq | -1.729 | -3.095 |
| MHCII_jason_reseq | -1.339 | -3.051 |
| Isoniazid02 | 1.461 | 0.301 |
| Rifampicin4 | -1.424 | -0.379 |
| Ethambutol3 | 0.062 | 2.148 |
| Meropenem3 | 1.488 | 1.319 |
| Vancomycin16 | -0.759 | 0.231 |
| Rv2680_day32 | -1.588 | -2.152 |
| H37Rv_KO_MarP | 0.938 | 1.091 |
| hypoxia_3wks | -0.754 | -0.14 |
| hypoxia_6wks | -0.883 | -0.276 |
| glycerol | -0.784 | -0.376 |
| cholesterol | -0.354 | 0.317 |
| AJ | -1.992 | -5.94 |
| Bibs02 | -0.815 | -6.0 |
| Bibs02c | -2.495 | -3.504 |
| BL6 | -1.298 | -2.513 |
| BL6a | -2.303 | -3.579 |
| BXD01 | -2.047 | -3.629 |
| BXD010 | -1.567 | -3.073 |
| BXD011 | -1.241 | -3.299 |
| BXD03 | -1.302 | -3.502 |
| BXD04 | -1.917 | -2.55 |
| BXD05 | -1.976 | -3.799 |
| BXD06 | -2.157 | -3.819 |
| BXD07 | -2.006 | -3.254 |
| BXD08 | -1.852 | -3.805 |
| BXD09 | -1.931 | -4.193 |
| CAST | -2.054 | -4.92 |
| CCcont | -0.78 | -1.079 |
| DS01 | -2.483 | -4.336 |
| DS02 | -1.336 | -3.929 |
| DS04 | -1.753 | -2.034 |
| DS0c | -1.614 | -4.552 |
| GP01 | 0.024 | -2.946 |
| GP02 | -0.025 | -2.891 |
| GP0c | -0.776 | -1.04 |
| NOD | -0.952 | -1.808 |
| NZO | -2.319 | -5.557 |
| PWK | -1.684 | -5.201 |
| H37Rv_KO_CtpC | -0.773 | -1.915 |
| H37Rv_KO_CtpD | 0.23 | -1.944 |
| H37Rv_KO_Rv1272 | -1.34 | -2.651 |
| H37Rv_KO_SugABC | -0.248 | -0.819 |
| H37Rv_KO_MbtN | -1.168 | 0.476 |
| Trans05 | -1.39 | -1.832 |
| macrophage_unactivated | 0.672 | -0.978 |
| IL1 | 0.389 | -0.169 |
| Rapamycin | 0.338 | 0.249 |
| Tcell | 0.756 | -1.571 |
| GMCSF | 0.665 | 0.504 |
| IFNab | -0.36 | 1.835 |
| IFNg | 0.433 | -1.358 |
| IFNg_GMCSF1 | 0.606 | -1.012 |
| Rv1432_day32 | -1.119 | -1.288 |
| Rv1565c_day32 | -1.091 | -2.783 |
| secA2_input | 0.899 | 0.412 |
| delta_Rv3594 | -0.098 | 0.451 |
| delta_Rv3717 | -1.888 | -0.084 |
| delta_Rv3811 | -0.617 | 0.256 |
| delta_Rv0954 | 0.69 | 0.464 |
| PonA1 | 1.238 | -0.225 |
| EccD1_KO | 0.201 | 0.125 |
| EspI_KO | 0.479 | -0.046 |
| PE35_KO | 0.128 | -0.015 |
| PPE68_KO | 0.166 | -0.253 |
| glycerol2 | -0.254 | 0.156 |
| lignocerate | 0.335 | 0.488 |
| oleate | -0.176 | -0.071 |
| phosphatidylcholine | 0.634 | 0.49 |
| acetate | -0.246 | 0.401 |
| glucAc | -0.145 | 0.092 |
| Rv0950ko | 1.173 | 0.193 |
| Rv1096ko | 0.953 | -0.283 |
| Rv3684ko | 0.36 | 0.635 |
| delta_otsA_trehalose | 0.446 | -0.181 |