Top 10 genes with highest correlation to Rv3197/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1568/bioA | (cc=0.7512) | info on Rv1568/bioA |
| Rv0485/- | (cc=0.7483) | info on Rv0485/- |
| Rv3616c/espA | (cc=0.7336) | info on Rv3616c/espA |
| Rv3057c/- | (cc=0.7309) | info on Rv3057c/- |
| Rv3869/eccB1 | (cc=0.7283) | info on Rv3869/eccB1 |
| Rv1493/mutB | (cc=0.7252) | info on Rv1493/mutB |
| Rv3870/eccCa1 | (cc=0.7239) | info on Rv3870/eccCa1 |
| Rv1590/- | (cc=0.7218) | info on Rv1590/- |
| Rv1569/bioF1 | (cc=0.721) | info on Rv1569/bioF1 |
| Rv3551/- | (cc=0.7199) | info on Rv3551/- |
Correlation of Rv3197/- with Rv1493/mutB
Normalized LFCs for Rv3197/-:
(description and provenance of datasets)
| Rv3197/- | Rv1493/mutB | |
| Fe_supp_jason_reseq | 0.865 | 0.581 |
| low_pH_jason_reseq | -1.295 | -0.313 |
| NO_jason_reseq | 0.407 | -0.764 |
| B6_jason_reseq | -1.729 | -2.724 |
| MHCII_jason_reseq | -1.339 | -0.977 |
| Isoniazid02 | 1.461 | 1.15 |
| Rifampicin4 | -1.424 | 0.1 |
| Ethambutol3 | 0.062 | -0.046 |
| Meropenem3 | 1.488 | 0.785 |
| Vancomycin16 | -0.759 | 0.239 |
| Rv2680_day32 | -1.588 | -0.936 |
| H37Rv_KO_MarP | 0.938 | 0.277 |
| hypoxia_3wks | -0.754 | -0.251 |
| hypoxia_6wks | -0.883 | -0.363 |
| glycerol | -0.784 | -0.332 |
| cholesterol | -0.354 | -0.295 |
| AJ | -1.992 | -1.839 |
| Bibs02 | -0.815 | -0.591 |
| Bibs02c | -2.495 | -0.565 |
| BL6 | -1.298 | -1.356 |
| BL6a | -2.303 | -1.333 |
| BXD01 | -2.047 | -1.274 |
| BXD010 | -1.567 | -0.335 |
| BXD011 | -1.241 | -0.569 |
| BXD03 | -1.302 | -1.13 |
| BXD04 | -1.917 | -0.771 |
| BXD05 | -1.976 | -0.906 |
| BXD06 | -2.157 | -0.95 |
| BXD07 | -2.006 | -0.897 |
| BXD08 | -1.852 | -1.093 |
| BXD09 | -1.931 | -1.195 |
| CAST | -2.054 | -1.925 |
| CCcont | -0.78 | -0.317 |
| DS01 | -2.483 | -1.839 |
| DS02 | -1.336 | -3.239 |
| DS04 | -1.753 | -2.067 |
| DS0c | -1.614 | -1.431 |
| GP01 | 0.024 | 0.274 |
| GP02 | -0.025 | -0.671 |
| GP0c | -0.776 | -0.008 |
| NOD | -0.952 | -0.317 |
| NZO | -2.319 | -1.244 |
| PWK | -1.684 | -1.154 |
| H37Rv_KO_CtpC | -0.773 | -1.243 |
| H37Rv_KO_CtpD | 0.23 | 0.216 |
| H37Rv_KO_Rv1272 | -1.34 | -0.047 |
| H37Rv_KO_SugABC | -0.248 | -0.903 |
| H37Rv_KO_MbtN | -1.168 | -1.563 |
| Trans05 | -1.39 | -0.982 |
| macrophage_unactivated | 0.672 | 0.442 |
| IL1 | 0.389 | 0.507 |
| Rapamycin | 0.338 | 0.617 |
| Tcell | 0.756 | -0.029 |
| GMCSF | 0.665 | 0.243 |
| IFNab | -0.36 | 0.423 |
| IFNg | 0.433 | 0.518 |
| IFNg_GMCSF1 | 0.606 | 0.537 |
| Rv1432_day32 | -1.119 | 0.027 |
| Rv1565c_day32 | -1.091 | -0.897 |
| secA2_input | 0.899 | 0.149 |
| delta_Rv3594 | -0.098 | 0.0 |
| delta_Rv3717 | -1.888 | -0.238 |
| delta_Rv3811 | -0.617 | -0.1 |
| delta_Rv0954 | 0.69 | 0.359 |
| PonA1 | 1.238 | -0.412 |
| EccD1_KO | 0.201 | 0.793 |
| EspI_KO | 0.479 | 0.619 |
| PE35_KO | 0.128 | 0.75 |
| PPE68_KO | 0.166 | 0.694 |
| glycerol2 | -0.254 | -0.017 |
| lignocerate | 0.335 | 0.202 |
| oleate | -0.176 | 0.065 |
| phosphatidylcholine | 0.634 | 0.246 |
| acetate | -0.246 | 0.095 |
| glucAc | -0.145 | 0.172 |
| Rv0950ko | 1.173 | 0.109 |
| Rv1096ko | 0.953 | -0.464 |
| Rv3684ko | 0.36 | -0.121 |
| delta_otsA_trehalose | 0.446 | 0.198 |