Top 10 genes with highest correlation to Rv3197/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1568/bioA | (cc=0.7512) | info on Rv1568/bioA |
| Rv0485/- | (cc=0.7483) | info on Rv0485/- |
| Rv3616c/espA | (cc=0.7336) | info on Rv3616c/espA |
| Rv3057c/- | (cc=0.7309) | info on Rv3057c/- |
| Rv3869/eccB1 | (cc=0.7283) | info on Rv3869/eccB1 |
| Rv1493/mutB | (cc=0.7252) | info on Rv1493/mutB |
| Rv3870/eccCa1 | (cc=0.7239) | info on Rv3870/eccCa1 |
| Rv1590/- | (cc=0.7218) | info on Rv1590/- |
| Rv1569/bioF1 | (cc=0.721) | info on Rv1569/bioF1 |
| Rv3551/- | (cc=0.7199) | info on Rv3551/- |
Correlation of Rv3197/- with Rv3057c/-
Normalized LFCs for Rv3197/-:
(description and provenance of datasets)
| Rv3197/- | Rv3057c/- | |
| Fe_supp_jason_reseq | 0.865 | -0.59 |
| low_pH_jason_reseq | -1.295 | -0.609 |
| NO_jason_reseq | 0.407 | -0.84 |
| B6_jason_reseq | -1.729 | -2.072 |
| MHCII_jason_reseq | -1.339 | -1.985 |
| Isoniazid02 | 1.461 | -0.333 |
| Rifampicin4 | -1.424 | -0.084 |
| Ethambutol3 | 0.062 | -0.285 |
| Meropenem3 | 1.488 | 0.713 |
| Vancomycin16 | -0.759 | 1.724 |
| Rv2680_day32 | -1.588 | -2.261 |
| H37Rv_KO_MarP | 0.938 | 0.047 |
| hypoxia_3wks | -0.754 | -0.542 |
| hypoxia_6wks | -0.883 | -0.716 |
| glycerol | -0.784 | -1.164 |
| cholesterol | -0.354 | -0.547 |
| AJ | -1.992 | -2.245 |
| Bibs02 | -0.815 | -1.888 |
| Bibs02c | -2.495 | -2.123 |
| BL6 | -1.298 | -1.134 |
| BL6a | -2.303 | -2.414 |
| BXD01 | -2.047 | -2.872 |
| BXD010 | -1.567 | -1.1 |
| BXD011 | -1.241 | -2.12 |
| BXD03 | -1.302 | -1.068 |
| BXD04 | -1.917 | -2.004 |
| BXD05 | -1.976 | -1.993 |
| BXD06 | -2.157 | -2.135 |
| BXD07 | -2.006 | -1.915 |
| BXD08 | -1.852 | -2.02 |
| BXD09 | -1.931 | -2.19 |
| CAST | -2.054 | -1.775 |
| CCcont | -0.78 | -0.965 |
| DS01 | -2.483 | -3.037 |
| DS02 | -1.336 | -2.511 |
| DS04 | -1.753 | -2.965 |
| DS0c | -1.614 | -2.362 |
| GP01 | 0.024 | -1.134 |
| GP02 | -0.025 | -1.13 |
| GP0c | -0.776 | -1.131 |
| NOD | -0.952 | -1.03 |
| NZO | -2.319 | -2.25 |
| PWK | -1.684 | -1.071 |
| H37Rv_KO_CtpC | -0.773 | 0.224 |
| H37Rv_KO_CtpD | 0.23 | -0.668 |
| H37Rv_KO_Rv1272 | -1.34 | -1.491 |
| H37Rv_KO_SugABC | -0.248 | -2.062 |
| H37Rv_KO_MbtN | -1.168 | -1.317 |
| Trans05 | -1.39 | -2.483 |
| macrophage_unactivated | 0.672 | -0.571 |
| IL1 | 0.389 | 0.228 |
| Rapamycin | 0.338 | 0.285 |
| Tcell | 0.756 | 0.476 |
| GMCSF | 0.665 | 0.372 |
| IFNab | -0.36 | 0.218 |
| IFNg | 0.433 | 0.417 |
| IFNg_GMCSF1 | 0.606 | 0.459 |
| Rv1432_day32 | -1.119 | -3.233 |
| Rv1565c_day32 | -1.091 | 0.049 |
| secA2_input | 0.899 | -0.014 |
| delta_Rv3594 | -0.098 | -2.074 |
| delta_Rv3717 | -1.888 | -3.053 |
| delta_Rv3811 | -0.617 | -1.991 |
| delta_Rv0954 | 0.69 | 0.77 |
| PonA1 | 1.238 | 0.555 |
| EccD1_KO | 0.201 | 0.888 |
| EspI_KO | 0.479 | 0.844 |
| PE35_KO | 0.128 | 0.149 |
| PPE68_KO | 0.166 | 0.506 |
| glycerol2 | -0.254 | 0.914 |
| lignocerate | 0.335 | -0.96 |
| oleate | -0.176 | -1.733 |
| phosphatidylcholine | 0.634 | -0.978 |
| acetate | -0.246 | 0.382 |
| glucAc | -0.145 | 0.303 |
| Rv0950ko | 1.173 | -0.292 |
| Rv1096ko | 0.953 | 0.558 |
| Rv3684ko | 0.36 | -0.626 |
| delta_otsA_trehalose | 0.446 | -0.35 |