Top 10 genes with highest correlation to Rv3197/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1568/bioA | (cc=0.7512) | info on Rv1568/bioA |
| Rv0485/- | (cc=0.7483) | info on Rv0485/- |
| Rv3616c/espA | (cc=0.7336) | info on Rv3616c/espA |
| Rv3057c/- | (cc=0.7309) | info on Rv3057c/- |
| Rv3869/eccB1 | (cc=0.7283) | info on Rv3869/eccB1 |
| Rv1493/mutB | (cc=0.7252) | info on Rv1493/mutB |
| Rv3870/eccCa1 | (cc=0.7239) | info on Rv3870/eccCa1 |
| Rv1590/- | (cc=0.7218) | info on Rv1590/- |
| Rv1569/bioF1 | (cc=0.721) | info on Rv1569/bioF1 |
| Rv3551/- | (cc=0.7199) | info on Rv3551/- |
Correlation of Rv3197/- with Rv0485/-
Normalized LFCs for Rv3197/-:
(description and provenance of datasets)
| Rv3197/- | Rv0485/- | |
| Fe_supp_jason_reseq | 0.865 | -0.56 |
| low_pH_jason_reseq | -1.295 | -1.026 |
| NO_jason_reseq | 0.407 | -2.242 |
| B6_jason_reseq | -1.729 | -4.618 |
| MHCII_jason_reseq | -1.339 | -3.592 |
| Isoniazid02 | 1.461 | -0.454 |
| Rifampicin4 | -1.424 | -0.393 |
| Ethambutol3 | 0.062 | 0.181 |
| Meropenem3 | 1.488 | -1.181 |
| Vancomycin16 | -0.759 | -0.557 |
| Rv2680_day32 | -1.588 | -3.166 |
| H37Rv_KO_MarP | 0.938 | 0.24 |
| hypoxia_3wks | -0.754 | 0.159 |
| hypoxia_6wks | -0.883 | -0.722 |
| glycerol | -0.784 | -0.413 |
| cholesterol | -0.354 | -3.975 |
| AJ | -1.992 | -4.686 |
| Bibs02 | -0.815 | -3.876 |
| Bibs02c | -2.495 | -3.778 |
| BL6 | -1.298 | -3.118 |
| BL6a | -2.303 | -4.417 |
| BXD01 | -2.047 | -3.065 |
| BXD010 | -1.567 | -3.013 |
| BXD011 | -1.241 | -2.635 |
| BXD03 | -1.302 | -3.015 |
| BXD04 | -1.917 | -2.757 |
| BXD05 | -1.976 | -2.718 |
| BXD06 | -2.157 | -3.542 |
| BXD07 | -2.006 | -3.674 |
| BXD08 | -1.852 | -3.219 |
| BXD09 | -1.931 | -3.306 |
| CAST | -2.054 | -4.443 |
| CCcont | -0.78 | -0.011 |
| DS01 | -2.483 | -5.006 |
| DS02 | -1.336 | -2.27 |
| DS04 | -1.753 | -4.112 |
| DS0c | -1.614 | -4.381 |
| GP01 | 0.024 | -0.576 |
| GP02 | -0.025 | -0.338 |
| GP0c | -0.776 | -0.379 |
| NOD | -0.952 | -2.302 |
| NZO | -2.319 | -4.028 |
| PWK | -1.684 | -2.842 |
| H37Rv_KO_CtpC | -0.773 | -3.064 |
| H37Rv_KO_CtpD | 0.23 | -1.944 |
| H37Rv_KO_Rv1272 | -1.34 | -2.297 |
| H37Rv_KO_SugABC | -0.248 | -1.715 |
| H37Rv_KO_MbtN | -1.168 | -0.775 |
| Trans05 | -1.39 | -3.074 |
| macrophage_unactivated | 0.672 | 0.189 |
| IL1 | 0.389 | 0.774 |
| Rapamycin | 0.338 | 1.056 |
| Tcell | 0.756 | -1.567 |
| GMCSF | 0.665 | -0.945 |
| IFNab | -0.36 | 0.441 |
| IFNg | 0.433 | -1.403 |
| IFNg_GMCSF1 | 0.606 | -1.697 |
| Rv1432_day32 | -1.119 | -4.519 |
| Rv1565c_day32 | -1.091 | -4.547 |
| secA2_input | 0.899 | 0.492 |
| delta_Rv3594 | -0.098 | 0.032 |
| delta_Rv3717 | -1.888 | -0.671 |
| delta_Rv3811 | -0.617 | -0.064 |
| delta_Rv0954 | 0.69 | 0.862 |
| PonA1 | 1.238 | 0.77 |
| EccD1_KO | 0.201 | 0.174 |
| EspI_KO | 0.479 | 0.297 |
| PE35_KO | 0.128 | 0.193 |
| PPE68_KO | 0.166 | 0.042 |
| glycerol2 | -0.254 | 1.275 |
| lignocerate | 0.335 | 0.315 |
| oleate | -0.176 | -0.065 |
| phosphatidylcholine | 0.634 | 0.77 |
| acetate | -0.246 | -0.043 |
| glucAc | -0.145 | -0.54 |
| Rv0950ko | 1.173 | 0.377 |
| Rv1096ko | 0.953 | 0.47 |
| Rv3684ko | 0.36 | 0.262 |
| delta_otsA_trehalose | 0.446 | -0.263 |