Top 10 genes with highest correlation to Rv3117/cysA3:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0815c/cysA2 | (cc=0.9716) | info on Rv0815c/cysA2 |
| Rv1538c/ansA | (cc=0.5622) | info on Rv1538c/ansA |
| Rv2949c/- | (cc=0.5261) | info on Rv2949c/- |
| Rv0916c/PE7 | (cc=0.502) | info on Rv0916c/PE7 |
| Rv0346c/ansP2 | (cc=0.4755) | info on Rv0346c/ansP2 |
| Rv3217c/- | (cc=0.4506) | info on Rv3217c/- |
| Rv2950c/fadD29 | (cc=0.4483) | info on Rv2950c/fadD29 |
| Rv1790/PPE27 | (cc=0.441) | info on Rv1790/PPE27 |
| Rv2082/- | (cc=0.4363) | info on Rv2082/- |
| Rv1087A/- | (cc=0.4309) | info on Rv1087A/- |
Correlation of Rv3117/cysA3 with Rv2082/-
Normalized LFCs for Rv3117/cysA3:
(description and provenance of datasets)
| Rv3117/cysA3 | Rv2082/- | |
| Fe_supp_jason_reseq | 0.246 | -0.074 |
| low_pH_jason_reseq | -0.361 | -0.694 |
| NO_jason_reseq | 1.26 | 0.053 |
| B6_jason_reseq | -0.31 | 0.085 |
| MHCII_jason_reseq | -0.652 | 0.593 |
| Isoniazid02 | -1.618 | -0.614 |
| Rifampicin4 | 0.387 | 0.089 |
| Ethambutol3 | 0.063 | -0.54 |
| Meropenem3 | -0.715 | -0.888 |
| Vancomycin16 | -0.345 | -0.825 |
| Rv2680_day32 | -0.053 | 0.216 |
| H37Rv_KO_MarP | -0.1 | -0.148 |
| hypoxia_3wks | -0.726 | -0.136 |
| hypoxia_6wks | -0.507 | 0.027 |
| glycerol | -2.765 | -1.066 |
| cholesterol | -2.069 | -0.66 |
| AJ | -0.627 | 0.294 |
| Bibs02 | -0.274 | 0.547 |
| Bibs02c | -0.702 | -0.126 |
| BL6 | -0.203 | -0.034 |
| BL6a | -0.495 | 0.105 |
| BXD01 | -0.392 | -0.209 |
| BXD010 | -0.291 | 0.029 |
| BXD011 | -0.18 | 0.161 |
| BXD03 | 0.323 | 0.224 |
| BXD04 | 0.11 | 0.086 |
| BXD05 | -0.414 | -0.195 |
| BXD06 | -0.295 | -0.006 |
| BXD07 | -0.474 | 0.303 |
| BXD08 | -0.451 | -0.012 |
| BXD09 | -0.371 | -0.012 |
| CAST | 0.012 | -0.16 |
| CCcont | 0.213 | -0.248 |
| DS01 | -1.013 | -0.043 |
| DS02 | -0.882 | 0.285 |
| DS04 | -0.447 | 0.069 |
| DS0c | 0.077 | -0.292 |
| GP01 | -0.79 | 0.36 |
| GP02 | -0.494 | 0.943 |
| GP0c | -0.333 | -0.161 |
| NOD | -0.675 | -0.457 |
| NZO | -0.676 | 0.181 |
| PWK | -0.163 | 0.249 |
| H37Rv_KO_CtpC | -0.164 | 0.044 |
| H37Rv_KO_CtpD | -0.098 | 0.253 |
| H37Rv_KO_Rv1272 | -0.052 | 0.201 |
| H37Rv_KO_SugABC | -0.354 | 0.408 |
| H37Rv_KO_MbtN | -0.384 | 0.046 |
| Trans05 | 0.085 | 0.356 |
| macrophage_unactivated | 0.123 | 0.126 |
| IL1 | -0.276 | 0.297 |
| Rapamycin | -0.565 | -0.144 |
| Tcell | 0.114 | -0.472 |
| GMCSF | -0.438 | -0.092 |
| IFNab | -0.517 | -0.124 |
| IFNg | -0.305 | 0.179 |
| IFNg_GMCSF1 | -0.28 | 0.591 |
| Rv1432_day32 | -0.158 | 0.0 |
| Rv1565c_day32 | -1.093 | -0.33 |
| secA2_input | 0.612 | -0.232 |
| delta_Rv3594 | 0.125 | 0.785 |
| delta_Rv3717 | 0.0 | 0.101 |
| delta_Rv3811 | 0.183 | 0.424 |
| delta_Rv0954 | -0.016 | 0.55 |
| PonA1 | -0.776 | 0.11 |
| EccD1_KO | 0.408 | 0.497 |
| EspI_KO | 1.144 | 0.673 |
| PE35_KO | 0.671 | -0.123 |
| PPE68_KO | 0.915 | 0.109 |
| glycerol2 | 0.57 | 0.106 |
| lignocerate | 0.442 | 0.41 |
| oleate | 0.282 | 0.084 |
| phosphatidylcholine | 0.518 | 0.424 |
| acetate | 0.522 | 0.206 |
| glucAc | 0.517 | 0.37 |
| Rv0950ko | 0.081 | 0.446 |
| Rv1096ko | -0.262 | 0.329 |
| Rv3684ko | -1.339 | -0.213 |
| delta_otsA_trehalose | -0.014 | -0.065 |