Top 10 genes with highest correlation to Rv3117/cysA3:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0815c/cysA2 | (cc=0.9716) | info on Rv0815c/cysA2 |
| Rv1538c/ansA | (cc=0.5622) | info on Rv1538c/ansA |
| Rv2949c/- | (cc=0.5261) | info on Rv2949c/- |
| Rv0916c/PE7 | (cc=0.502) | info on Rv0916c/PE7 |
| Rv0346c/ansP2 | (cc=0.4755) | info on Rv0346c/ansP2 |
| Rv3217c/- | (cc=0.4506) | info on Rv3217c/- |
| Rv2950c/fadD29 | (cc=0.4483) | info on Rv2950c/fadD29 |
| Rv1790/PPE27 | (cc=0.441) | info on Rv1790/PPE27 |
| Rv2082/- | (cc=0.4363) | info on Rv2082/- |
| Rv1087A/- | (cc=0.4309) | info on Rv1087A/- |
Correlation of Rv3117/cysA3 with Rv1538c/ansA
Normalized LFCs for Rv3117/cysA3:
(description and provenance of datasets)
| Rv3117/cysA3 | Rv1538c/ansA | |
| Fe_supp_jason_reseq | 0.246 | -0.957 |
| low_pH_jason_reseq | -0.361 | -1.168 |
| NO_jason_reseq | 1.26 | 0.032 |
| B6_jason_reseq | -0.31 | -3.362 |
| MHCII_jason_reseq | -0.652 | -2.132 |
| Isoniazid02 | -1.618 | -1.713 |
| Rifampicin4 | 0.387 | -0.376 |
| Ethambutol3 | 0.063 | 1.36 |
| Meropenem3 | -0.715 | -0.527 |
| Vancomycin16 | -0.345 | -1.048 |
| Rv2680_day32 | -0.053 | -2.826 |
| H37Rv_KO_MarP | -0.1 | 0.563 |
| hypoxia_3wks | -0.726 | -2.265 |
| hypoxia_6wks | -0.507 | -3.168 |
| glycerol | -2.765 | -6.0 |
| cholesterol | -2.069 | -4.849 |
| AJ | -0.627 | -1.249 |
| Bibs02 | -0.274 | -0.629 |
| Bibs02c | -0.702 | -2.035 |
| BL6 | -0.203 | -2.408 |
| BL6a | -0.495 | -2.175 |
| BXD01 | -0.392 | -2.777 |
| BXD010 | -0.291 | -1.114 |
| BXD011 | -0.18 | -1.772 |
| BXD03 | 0.323 | -1.642 |
| BXD04 | 0.11 | -1.484 |
| BXD05 | -0.414 | -2.133 |
| BXD06 | -0.295 | -2.195 |
| BXD07 | -0.474 | -2.365 |
| BXD08 | -0.451 | -1.893 |
| BXD09 | -0.371 | -2.024 |
| CAST | 0.012 | -1.445 |
| CCcont | 0.213 | -0.741 |
| DS01 | -1.013 | -2.324 |
| DS02 | -0.882 | -1.314 |
| DS04 | -0.447 | -3.49 |
| DS0c | 0.077 | -2.305 |
| GP01 | -0.79 | -1.708 |
| GP02 | -0.494 | -2.324 |
| GP0c | -0.333 | -2.138 |
| NOD | -0.675 | -1.131 |
| NZO | -0.676 | -1.962 |
| PWK | -0.163 | -1.027 |
| H37Rv_KO_CtpC | -0.164 | -1.824 |
| H37Rv_KO_CtpD | -0.098 | -1.331 |
| H37Rv_KO_Rv1272 | -0.052 | -2.605 |
| H37Rv_KO_SugABC | -0.354 | -1.394 |
| H37Rv_KO_MbtN | -0.384 | -1.451 |
| Trans05 | 0.085 | -2.35 |
| macrophage_unactivated | 0.123 | -1.424 |
| IL1 | -0.276 | -1.444 |
| Rapamycin | -0.565 | -1.203 |
| Tcell | 0.114 | 0.593 |
| GMCSF | -0.438 | -1.885 |
| IFNab | -0.517 | -1.944 |
| IFNg | -0.305 | -1.831 |
| IFNg_GMCSF1 | -0.28 | -1.125 |
| Rv1432_day32 | -0.158 | -2.924 |
| Rv1565c_day32 | -1.093 | -2.281 |
| secA2_input | 0.612 | 1.058 |
| delta_Rv3594 | 0.125 | 0.389 |
| delta_Rv3717 | 0.0 | -0.283 |
| delta_Rv3811 | 0.183 | 0.4 |
| delta_Rv0954 | -0.016 | 1.304 |
| PonA1 | -0.776 | 0.906 |
| EccD1_KO | 0.408 | -0.76 |
| EspI_KO | 1.144 | -1.32 |
| PE35_KO | 0.671 | -0.12 |
| PPE68_KO | 0.915 | -0.371 |
| glycerol2 | 0.57 | 0.161 |
| lignocerate | 0.442 | -0.32 |
| oleate | 0.282 | -0.373 |
| phosphatidylcholine | 0.518 | -0.368 |
| acetate | 0.522 | -0.437 |
| glucAc | 0.517 | -0.272 |
| Rv0950ko | 0.081 | 0.374 |
| Rv1096ko | -0.262 | 0.757 |
| Rv3684ko | -1.339 | 0.619 |
| delta_otsA_trehalose | -0.014 | -0.694 |