Top 10 genes with highest correlation to Rv3117/cysA3:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0815c/cysA2 | (cc=0.9716) | info on Rv0815c/cysA2 |
| Rv1538c/ansA | (cc=0.5622) | info on Rv1538c/ansA |
| Rv2949c/- | (cc=0.5261) | info on Rv2949c/- |
| Rv0916c/PE7 | (cc=0.502) | info on Rv0916c/PE7 |
| Rv0346c/ansP2 | (cc=0.4755) | info on Rv0346c/ansP2 |
| Rv3217c/- | (cc=0.4506) | info on Rv3217c/- |
| Rv2950c/fadD29 | (cc=0.4483) | info on Rv2950c/fadD29 |
| Rv1790/PPE27 | (cc=0.441) | info on Rv1790/PPE27 |
| Rv2082/- | (cc=0.4363) | info on Rv2082/- |
| Rv1087A/- | (cc=0.4309) | info on Rv1087A/- |
Correlation of Rv3117/cysA3 with Rv0916c/PE7
Normalized LFCs for Rv3117/cysA3:
(description and provenance of datasets)
| Rv3117/cysA3 | Rv0916c/PE7 | |
| Fe_supp_jason_reseq | 0.246 | -0.388 |
| low_pH_jason_reseq | -0.361 | -0.231 |
| NO_jason_reseq | 1.26 | 0.357 |
| B6_jason_reseq | -0.31 | -1.096 |
| MHCII_jason_reseq | -0.652 | -1.966 |
| Isoniazid02 | -1.618 | -0.023 |
| Rifampicin4 | 0.387 | 0.747 |
| Ethambutol3 | 0.063 | 1.126 |
| Meropenem3 | -0.715 | 0.147 |
| Vancomycin16 | -0.345 | 0.626 |
| Rv2680_day32 | -0.053 | 0.0 |
| H37Rv_KO_MarP | -0.1 | 0.181 |
| hypoxia_3wks | -0.726 | 0.55 |
| hypoxia_6wks | -0.507 | -0.99 |
| glycerol | -2.765 | -2.782 |
| cholesterol | -2.069 | -2.164 |
| AJ | -0.627 | -0.709 |
| Bibs02 | -0.274 | -2.731 |
| Bibs02c | -0.702 | -1.958 |
| BL6 | -0.203 | 0.435 |
| BL6a | -0.495 | -1.24 |
| BXD01 | -0.392 | -0.45 |
| BXD010 | -0.291 | 0.404 |
| BXD011 | -0.18 | 0.904 |
| BXD03 | 0.323 | 1.019 |
| BXD04 | 0.11 | -1.349 |
| BXD05 | -0.414 | -0.493 |
| BXD06 | -0.295 | 0.019 |
| BXD07 | -0.474 | -0.628 |
| BXD08 | -0.451 | -0.433 |
| BXD09 | -0.371 | -0.702 |
| CAST | 0.012 | -0.445 |
| CCcont | 0.213 | -0.114 |
| DS01 | -1.013 | -0.375 |
| DS02 | -0.882 | -1.812 |
| DS04 | -0.447 | -1.321 |
| DS0c | 0.077 | 0.27 |
| GP01 | -0.79 | -1.077 |
| GP02 | -0.494 | 0.34 |
| GP0c | -0.333 | -1.314 |
| NOD | -0.675 | -0.171 |
| NZO | -0.676 | 0.968 |
| PWK | -0.163 | 0.597 |
| H37Rv_KO_CtpC | -0.164 | 1.304 |
| H37Rv_KO_CtpD | -0.098 | -0.412 |
| H37Rv_KO_Rv1272 | -0.052 | 0.041 |
| H37Rv_KO_SugABC | -0.354 | 1.18 |
| H37Rv_KO_MbtN | -0.384 | 1.584 |
| Trans05 | 0.085 | 1.003 |
| macrophage_unactivated | 0.123 | 0.085 |
| IL1 | -0.276 | -0.08 |
| Rapamycin | -0.565 | 1.037 |
| Tcell | 0.114 | 0.583 |
| GMCSF | -0.438 | 1.22 |
| IFNab | -0.517 | 0.082 |
| IFNg | -0.305 | 1.181 |
| IFNg_GMCSF1 | -0.28 | 0.924 |
| Rv1432_day32 | -0.158 | 0.0 |
| Rv1565c_day32 | -1.093 | 0.818 |
| secA2_input | 0.612 | -0.938 |
| delta_Rv3594 | 0.125 | 0.895 |
| delta_Rv3717 | 0.0 | 0.405 |
| delta_Rv3811 | 0.183 | 0.7 |
| delta_Rv0954 | -0.016 | 1.473 |
| PonA1 | -0.776 | -0.118 |
| EccD1_KO | 0.408 | 1.125 |
| EspI_KO | 1.144 | 3.434 |
| PE35_KO | 0.671 | 1.114 |
| PPE68_KO | 0.915 | 2.857 |
| glycerol2 | 0.57 | -0.031 |
| lignocerate | 0.442 | 0.105 |
| oleate | 0.282 | -0.537 |
| phosphatidylcholine | 0.518 | -0.063 |
| acetate | 0.522 | 0.178 |
| glucAc | 0.517 | 0.213 |
| Rv0950ko | 0.081 | 0.193 |
| Rv1096ko | -0.262 | -0.16 |
| Rv3684ko | -1.339 | -0.085 |
| delta_otsA_trehalose | -0.014 | 1.489 |