Top 10 genes with highest correlation to Rv3069/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2010/vapC15 | (cc=0.5865) | info on Rv2010/vapC15 |
| Rv2628/- | (cc=0.5602) | info on Rv2628/- |
| Rv0953c/- | (cc=0.5241) | info on Rv0953c/- |
| Rv1736c/narX | (cc=0.5103) | info on Rv1736c/narX |
| Rv1940/ribA1 | (cc=0.4978) | info on Rv1940/ribA1 |
| Rv3519/- | (cc=0.4877) | info on Rv3519/- |
| Rv1939/- | (cc=0.4849) | info on Rv1939/- |
| Rv1250/- | (cc=0.4655) | info on Rv1250/- |
| Rv2624c/- | (cc=0.4581) | info on Rv2624c/- |
| Rv1267c/embR | (cc=0.4539) | info on Rv1267c/embR |
Correlation of Rv3069/- with Rv2624c/-
Normalized LFCs for Rv3069/-:
(description and provenance of datasets)
| Rv3069/- | Rv2624c/- | |
| Fe_supp_jason_reseq | -1.525 | 1.249 |
| low_pH_jason_reseq | 1.111 | -0.35 |
| NO_jason_reseq | 1.297 | 1.431 |
| B6_jason_reseq | 0.619 | 0.042 |
| MHCII_jason_reseq | 1.495 | 1.43 |
| Isoniazid02 | -1.008 | 0.0 |
| Rifampicin4 | -0.252 | 1.784 |
| Ethambutol3 | -0.755 | 2.42 |
| Meropenem3 | -0.182 | 0.98 |
| Vancomycin16 | -0.621 | 0.974 |
| Rv2680_day32 | -0.51 | 0.0 |
| H37Rv_KO_MarP | 0.192 | 0.72 |
| hypoxia_3wks | -0.072 | -0.096 |
| hypoxia_6wks | 0.177 | -0.367 |
| glycerol | 0.285 | -0.841 |
| cholesterol | -0.383 | -0.089 |
| AJ | 0.419 | 0.034 |
| Bibs02 | 0.0 | 0.543 |
| Bibs02c | 0.13 | -0.65 |
| BL6 | -0.323 | -2.544 |
| BL6a | -0.181 | -0.781 |
| BXD01 | -0.851 | -0.601 |
| BXD010 | -1.639 | -0.162 |
| BXD011 | -0.678 | -0.849 |
| BXD03 | -1.268 | -1.843 |
| BXD04 | -1.815 | -1.496 |
| BXD05 | -1.323 | -1.058 |
| BXD06 | -0.494 | -0.215 |
| BXD07 | -0.737 | -1.045 |
| BXD08 | -1.247 | 0.096 |
| BXD09 | -1.018 | -0.897 |
| CAST | 0.073 | 0.068 |
| CCcont | -1.539 | -3.036 |
| DS01 | -0.01 | -0.782 |
| DS02 | 0.2 | -0.066 |
| DS04 | 0.129 | 1.058 |
| DS0c | 0.416 | -0.547 |
| GP01 | 1.214 | 0.293 |
| GP02 | 1.65 | 0.256 |
| GP0c | 0.68 | 0.744 |
| NOD | -0.76 | 0.483 |
| NZO | 0.036 | 0.199 |
| PWK | 0.063 | 0.114 |
| H37Rv_KO_CtpC | -0.248 | -0.75 |
| H37Rv_KO_CtpD | -2.98 | -2.334 |
| H37Rv_KO_Rv1272 | -0.39 | 0.082 |
| H37Rv_KO_SugABC | -1.097 | -1.35 |
| H37Rv_KO_MbtN | -1.025 | -0.385 |
| Trans05 | 0.152 | 0.758 |
| macrophage_unactivated | 1.297 | 0.385 |
| IL1 | 1.536 | -0.394 |
| Rapamycin | 0.865 | 0.129 |
| Tcell | 1.87 | -0.283 |
| GMCSF | 0.449 | 0.322 |
| IFNab | 0.729 | 0.127 |
| IFNg | 0.171 | -0.484 |
| IFNg_GMCSF1 | 2.262 | -0.135 |
| Rv1432_day32 | 0.249 | 0.481 |
| Rv1565c_day32 | 1.652 | -0.19 |
| secA2_input | -1.565 | -0.095 |
| delta_Rv3594 | -0.968 | -0.765 |
| delta_Rv3717 | -0.396 | -0.721 |
| delta_Rv3811 | 0.079 | -0.965 |
| delta_Rv0954 | 0.738 | -1.052 |
| PonA1 | 0.299 | -0.619 |
| EccD1_KO | 1.799 | 0.559 |
| EspI_KO | 1.517 | -0.359 |
| PE35_KO | 2.252 | 1.82 |
| PPE68_KO | 1.987 | 2.582 |
| glycerol2 | 0.025 | 0.0 |
| lignocerate | -0.565 | -0.897 |
| oleate | 0.496 | 0.715 |
| phosphatidylcholine | 0.013 | 0.108 |
| acetate | -1.275 | -1.084 |
| glucAc | -1.298 | -2.542 |
| Rv0950ko | -0.274 | -0.458 |
| Rv1096ko | 0.872 | 1.616 |
| Rv3684ko | -1.618 | -0.121 |
| delta_otsA_trehalose | -0.087 | 1.683 |