Top 10 genes with highest correlation to Rv3069/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2010/vapC15 | (cc=0.5865) | info on Rv2010/vapC15 |
| Rv2628/- | (cc=0.5602) | info on Rv2628/- |
| Rv0953c/- | (cc=0.5241) | info on Rv0953c/- |
| Rv1736c/narX | (cc=0.5103) | info on Rv1736c/narX |
| Rv1940/ribA1 | (cc=0.4978) | info on Rv1940/ribA1 |
| Rv3519/- | (cc=0.4877) | info on Rv3519/- |
| Rv1939/- | (cc=0.4849) | info on Rv1939/- |
| Rv1250/- | (cc=0.4655) | info on Rv1250/- |
| Rv2624c/- | (cc=0.4581) | info on Rv2624c/- |
| Rv1267c/embR | (cc=0.4539) | info on Rv1267c/embR |
Correlation of Rv3069/- with Rv1250/-
Normalized LFCs for Rv3069/-:
(description and provenance of datasets)
| Rv3069/- | Rv1250/- | |
| Fe_supp_jason_reseq | -1.525 | -0.278 |
| low_pH_jason_reseq | 1.111 | 0.244 |
| NO_jason_reseq | 1.297 | -0.462 |
| B6_jason_reseq | 0.619 | 0.485 |
| MHCII_jason_reseq | 1.495 | 0.332 |
| Isoniazid02 | -1.008 | -0.755 |
| Rifampicin4 | -0.252 | -0.065 |
| Ethambutol3 | -0.755 | -0.411 |
| Meropenem3 | -0.182 | 0.649 |
| Vancomycin16 | -0.621 | -0.218 |
| Rv2680_day32 | -0.51 | 0.846 |
| H37Rv_KO_MarP | 0.192 | 0.23 |
| hypoxia_3wks | -0.072 | 0.084 |
| hypoxia_6wks | 0.177 | -0.044 |
| glycerol | 0.285 | -0.19 |
| cholesterol | -0.383 | 0.035 |
| AJ | 0.419 | 0.109 |
| Bibs02 | 0.0 | 0.086 |
| Bibs02c | 0.13 | 0.17 |
| BL6 | -0.323 | -0.862 |
| BL6a | -0.181 | -0.307 |
| BXD01 | -0.851 | -0.517 |
| BXD010 | -1.639 | -1.023 |
| BXD011 | -0.678 | -0.358 |
| BXD03 | -1.268 | -0.783 |
| BXD04 | -1.815 | -0.57 |
| BXD05 | -1.323 | -0.658 |
| BXD06 | -0.494 | -0.554 |
| BXD07 | -0.737 | -0.625 |
| BXD08 | -1.247 | -0.117 |
| BXD09 | -1.018 | -0.621 |
| CAST | 0.073 | -0.202 |
| CCcont | -1.539 | -0.744 |
| DS01 | -0.01 | 0.243 |
| DS02 | 0.2 | 0.703 |
| DS04 | 0.129 | 0.273 |
| DS0c | 0.416 | 0.372 |
| GP01 | 1.214 | 0.117 |
| GP02 | 1.65 | -0.644 |
| GP0c | 0.68 | -0.753 |
| NOD | -0.76 | 0.207 |
| NZO | 0.036 | 0.094 |
| PWK | 0.063 | -0.134 |
| H37Rv_KO_CtpC | -0.248 | -0.049 |
| H37Rv_KO_CtpD | -2.98 | -1.284 |
| H37Rv_KO_Rv1272 | -0.39 | -0.238 |
| H37Rv_KO_SugABC | -1.097 | 0.32 |
| H37Rv_KO_MbtN | -1.025 | -0.125 |
| Trans05 | 0.152 | -0.23 |
| macrophage_unactivated | 1.297 | -0.398 |
| IL1 | 1.536 | -0.338 |
| Rapamycin | 0.865 | -0.387 |
| Tcell | 1.87 | -0.815 |
| GMCSF | 0.449 | -0.364 |
| IFNab | 0.729 | -0.1 |
| IFNg | 0.171 | -0.059 |
| IFNg_GMCSF1 | 2.262 | 0.236 |
| Rv1432_day32 | 0.249 | -0.245 |
| Rv1565c_day32 | 1.652 | 0.85 |
| secA2_input | -1.565 | 0.149 |
| delta_Rv3594 | -0.968 | -0.358 |
| delta_Rv3717 | -0.396 | -0.625 |
| delta_Rv3811 | 0.079 | -0.457 |
| delta_Rv0954 | 0.738 | -0.359 |
| PonA1 | 0.299 | -0.16 |
| EccD1_KO | 1.799 | 0.704 |
| EspI_KO | 1.517 | 0.97 |
| PE35_KO | 2.252 | 0.811 |
| PPE68_KO | 1.987 | 0.809 |
| glycerol2 | 0.025 | -0.343 |
| lignocerate | -0.565 | 0.157 |
| oleate | 0.496 | -0.098 |
| phosphatidylcholine | 0.013 | 0.167 |
| acetate | -1.275 | -0.216 |
| glucAc | -1.298 | -0.24 |
| Rv0950ko | -0.274 | -0.492 |
| Rv1096ko | 0.872 | 0.311 |
| Rv3684ko | -1.618 | -0.118 |
| delta_otsA_trehalose | -0.087 | -0.602 |