Top 10 genes with highest correlation to Rv3069/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv2010/vapC15 | (cc=0.5865) | info on Rv2010/vapC15 |
Rv2628/- | (cc=0.5602) | info on Rv2628/- |
Rv0953c/- | (cc=0.5241) | info on Rv0953c/- |
Rv1736c/narX | (cc=0.5103) | info on Rv1736c/narX |
Rv1940/ribA1 | (cc=0.4978) | info on Rv1940/ribA1 |
Rv3519/- | (cc=0.4877) | info on Rv3519/- |
Rv1939/- | (cc=0.4849) | info on Rv1939/- |
Rv1250/- | (cc=0.4655) | info on Rv1250/- |
Rv2624c/- | (cc=0.4581) | info on Rv2624c/- |
Rv1267c/embR | (cc=0.4539) | info on Rv1267c/embR |
Correlation of Rv3069/- with Rv1267c/embR
Normalized LFCs for Rv3069/-:
(description and provenance of datasets)
Rv3069/- | Rv1267c/embR | |
Fe_supp_jason_reseq | -1.525 | -0.406 |
low_pH_jason_reseq | 1.111 | -0.234 |
NO_jason_reseq | 1.297 | 0.184 |
B6_jason_reseq | 0.619 | 0.172 |
MHCII_jason_reseq | 1.495 | 1.059 |
Isoniazid02 | -1.008 | -0.367 |
Rifampicin4 | -0.252 | -0.06 |
Ethambutol3 | -0.755 | -0.291 |
Meropenem3 | -0.182 | -0.195 |
Vancomycin16 | -0.621 | -0.369 |
Rv2680_day32 | -0.51 | -0.344 |
H37Rv_KO_MarP | 0.192 | 0.683 |
hypoxia_3wks | -0.072 | -0.566 |
hypoxia_6wks | 0.177 | -0.679 |
glycerol | 0.285 | -0.199 |
cholesterol | -0.383 | -0.3 |
AJ | 0.419 | 0.449 |
Bibs02 | 0.0 | 0.045 |
Bibs02c | 0.13 | 0.917 |
BL6 | -0.323 | -0.098 |
BL6a | -0.181 | 0.58 |
BXD01 | -0.851 | -0.084 |
BXD010 | -1.639 | 0.1 |
BXD011 | -0.678 | 0.1 |
BXD03 | -1.268 | -0.725 |
BXD04 | -1.815 | 0.77 |
BXD05 | -1.323 | -0.453 |
BXD06 | -0.494 | -0.077 |
BXD07 | -0.737 | 0.365 |
BXD08 | -1.247 | -0.113 |
BXD09 | -1.018 | 0.242 |
CAST | 0.073 | 0.652 |
CCcont | -1.539 | -0.221 |
DS01 | -0.01 | 0.13 |
DS02 | 0.2 | -0.041 |
DS04 | 0.129 | 0.446 |
DS0c | 0.416 | 0.207 |
GP01 | 1.214 | 1.658 |
GP02 | 1.65 | 2.343 |
GP0c | 0.68 | 1.044 |
NOD | -0.76 | 0.812 |
NZO | 0.036 | 0.555 |
PWK | 0.063 | 0.35 |
H37Rv_KO_CtpC | -0.248 | -0.386 |
H37Rv_KO_CtpD | -2.98 | -0.272 |
H37Rv_KO_Rv1272 | -0.39 | 0.808 |
H37Rv_KO_SugABC | -1.097 | -0.342 |
H37Rv_KO_MbtN | -1.025 | -0.102 |
Trans05 | 0.152 | 0.54 |
macrophage_unactivated | 1.297 | 0.395 |
IL1 | 1.536 | 0.486 |
Rapamycin | 0.865 | 0.068 |
Tcell | 1.87 | 0.984 |
GMCSF | 0.449 | -0.235 |
IFNab | 0.729 | -0.828 |
IFNg | 0.171 | 0.946 |
IFNg_GMCSF1 | 2.262 | 0.694 |
Rv1432_day32 | 0.249 | 0.188 |
Rv1565c_day32 | 1.652 | 0.292 |
secA2_input | -1.565 | -0.2 |
delta_Rv3594 | -0.968 | 0.792 |
delta_Rv3717 | -0.396 | 0.944 |
delta_Rv3811 | 0.079 | 0.208 |
delta_Rv0954 | 0.738 | 0.699 |
PonA1 | 0.299 | 0.278 |
EccD1_KO | 1.799 | 1.125 |
EspI_KO | 1.517 | 0.388 |
PE35_KO | 2.252 | 1.03 |
PPE68_KO | 1.987 | 0.518 |
glycerol2 | 0.025 | 0.273 |
lignocerate | -0.565 | 0.581 |
oleate | 0.496 | 0.33 |
phosphatidylcholine | 0.013 | 0.545 |
acetate | -1.275 | 0.51 |
glucAc | -1.298 | 0.045 |
Rv0950ko | -0.274 | 0.308 |
Rv1096ko | 0.872 | 0.715 |
Rv3684ko | -1.618 | 0.475 |
delta_otsA_trehalose | -0.087 | 0.858 |