Top 10 genes with highest correlation to Rv3069/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2010/vapC15 | (cc=0.5865) | info on Rv2010/vapC15 |
| Rv2628/- | (cc=0.5602) | info on Rv2628/- |
| Rv0953c/- | (cc=0.5241) | info on Rv0953c/- |
| Rv1736c/narX | (cc=0.5103) | info on Rv1736c/narX |
| Rv1940/ribA1 | (cc=0.4978) | info on Rv1940/ribA1 |
| Rv3519/- | (cc=0.4877) | info on Rv3519/- |
| Rv1939/- | (cc=0.4849) | info on Rv1939/- |
| Rv1250/- | (cc=0.4655) | info on Rv1250/- |
| Rv2624c/- | (cc=0.4581) | info on Rv2624c/- |
| Rv1267c/embR | (cc=0.4539) | info on Rv1267c/embR |
Correlation of Rv3069/- with Rv0953c/-
Normalized LFCs for Rv3069/-:
(description and provenance of datasets)
| Rv3069/- | Rv0953c/- | |
| Fe_supp_jason_reseq | -1.525 | -0.702 |
| low_pH_jason_reseq | 1.111 | 0.32 |
| NO_jason_reseq | 1.297 | -0.176 |
| B6_jason_reseq | 0.619 | -0.244 |
| MHCII_jason_reseq | 1.495 | -0.04 |
| Isoniazid02 | -1.008 | -0.809 |
| Rifampicin4 | -0.252 | -0.054 |
| Ethambutol3 | -0.755 | -1.358 |
| Meropenem3 | -0.182 | -0.32 |
| Vancomycin16 | -0.621 | -1.178 |
| Rv2680_day32 | -0.51 | -0.285 |
| H37Rv_KO_MarP | 0.192 | -0.556 |
| hypoxia_3wks | -0.072 | -0.251 |
| hypoxia_6wks | 0.177 | 0.223 |
| glycerol | 0.285 | -0.758 |
| cholesterol | -0.383 | -0.766 |
| AJ | 0.419 | 0.113 |
| Bibs02 | 0.0 | 0.388 |
| Bibs02c | 0.13 | 0.576 |
| BL6 | -0.323 | -1.769 |
| BL6a | -0.181 | -0.593 |
| BXD01 | -0.851 | -1.413 |
| BXD010 | -1.639 | -0.947 |
| BXD011 | -0.678 | -0.891 |
| BXD03 | -1.268 | -2.05 |
| BXD04 | -1.815 | -1.529 |
| BXD05 | -1.323 | -0.995 |
| BXD06 | -0.494 | -1.288 |
| BXD07 | -0.737 | -1.268 |
| BXD08 | -1.247 | -0.577 |
| BXD09 | -1.018 | -1.525 |
| CAST | 0.073 | -0.497 |
| CCcont | -1.539 | -1.367 |
| DS01 | -0.01 | 0.193 |
| DS02 | 0.2 | 0.137 |
| DS04 | 0.129 | 0.086 |
| DS0c | 0.416 | 0.797 |
| GP01 | 1.214 | -0.077 |
| GP02 | 1.65 | 1.002 |
| GP0c | 0.68 | -0.067 |
| NOD | -0.76 | 0.034 |
| NZO | 0.036 | -0.155 |
| PWK | 0.063 | 0.196 |
| H37Rv_KO_CtpC | -0.248 | -0.705 |
| H37Rv_KO_CtpD | -2.98 | -1.393 |
| H37Rv_KO_Rv1272 | -0.39 | -1.472 |
| H37Rv_KO_SugABC | -1.097 | -0.994 |
| H37Rv_KO_MbtN | -1.025 | -0.896 |
| Trans05 | 0.152 | 0.177 |
| macrophage_unactivated | 1.297 | -0.136 |
| IL1 | 1.536 | -0.442 |
| Rapamycin | 0.865 | -0.755 |
| Tcell | 1.87 | 0.355 |
| GMCSF | 0.449 | -0.351 |
| IFNab | 0.729 | -1.058 |
| IFNg | 0.171 | -0.441 |
| IFNg_GMCSF1 | 2.262 | -0.518 |
| Rv1432_day32 | 0.249 | -0.287 |
| Rv1565c_day32 | 1.652 | 0.725 |
| secA2_input | -1.565 | 0.43 |
| delta_Rv3594 | -0.968 | -0.883 |
| delta_Rv3717 | -0.396 | -1.0 |
| delta_Rv3811 | 0.079 | -0.934 |
| delta_Rv0954 | 0.738 | 0.689 |
| PonA1 | 0.299 | 0.177 |
| EccD1_KO | 1.799 | -0.036 |
| EspI_KO | 1.517 | -0.596 |
| PE35_KO | 2.252 | 0.502 |
| PPE68_KO | 1.987 | 0.0 |
| glycerol2 | 0.025 | -0.09 |
| lignocerate | -0.565 | 0.123 |
| oleate | 0.496 | -0.269 |
| phosphatidylcholine | 0.013 | -0.136 |
| acetate | -1.275 | -0.356 |
| glucAc | -1.298 | -0.113 |
| Rv0950ko | -0.274 | 0.501 |
| Rv1096ko | 0.872 | -0.359 |
| Rv3684ko | -1.618 | -0.069 |
| delta_otsA_trehalose | -0.087 | -0.223 |