Top 10 genes with highest correlation to Rv3069/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2010/vapC15 | (cc=0.5865) | info on Rv2010/vapC15 |
| Rv2628/- | (cc=0.5602) | info on Rv2628/- |
| Rv0953c/- | (cc=0.5241) | info on Rv0953c/- |
| Rv1736c/narX | (cc=0.5103) | info on Rv1736c/narX |
| Rv1940/ribA1 | (cc=0.4978) | info on Rv1940/ribA1 |
| Rv3519/- | (cc=0.4877) | info on Rv3519/- |
| Rv1939/- | (cc=0.4849) | info on Rv1939/- |
| Rv1250/- | (cc=0.4655) | info on Rv1250/- |
| Rv2624c/- | (cc=0.4581) | info on Rv2624c/- |
| Rv1267c/embR | (cc=0.4539) | info on Rv1267c/embR |
Correlation of Rv3069/- with Rv2010/vapC15
Normalized LFCs for Rv3069/-:
(description and provenance of datasets)
| Rv3069/- | Rv2010/vapC15 | |
| Fe_supp_jason_reseq | -1.525 | -0.161 |
| low_pH_jason_reseq | 1.111 | 0.214 |
| NO_jason_reseq | 1.297 | 0.0 |
| B6_jason_reseq | 0.619 | -0.023 |
| MHCII_jason_reseq | 1.495 | -0.247 |
| Isoniazid02 | -1.008 | -1.924 |
| Rifampicin4 | -0.252 | -1.809 |
| Ethambutol3 | -0.755 | -1.902 |
| Meropenem3 | -0.182 | -1.904 |
| Vancomycin16 | -0.621 | -1.531 |
| Rv2680_day32 | -0.51 | -0.969 |
| H37Rv_KO_MarP | 0.192 | 0.213 |
| hypoxia_3wks | -0.072 | -0.339 |
| hypoxia_6wks | 0.177 | -0.958 |
| glycerol | 0.285 | -0.034 |
| cholesterol | -0.383 | -0.149 |
| AJ | 0.419 | 0.239 |
| Bibs02 | 0.0 | -0.419 |
| Bibs02c | 0.13 | -0.208 |
| BL6 | -0.323 | -0.176 |
| BL6a | -0.181 | -1.136 |
| BXD01 | -0.851 | -1.314 |
| BXD010 | -1.639 | -1.555 |
| BXD011 | -0.678 | -1.343 |
| BXD03 | -1.268 | -1.295 |
| BXD04 | -1.815 | -1.412 |
| BXD05 | -1.323 | -1.577 |
| BXD06 | -0.494 | -1.497 |
| BXD07 | -0.737 | -0.571 |
| BXD08 | -1.247 | -0.81 |
| BXD09 | -1.018 | -0.615 |
| CAST | 0.073 | -0.332 |
| CCcont | -1.539 | -2.214 |
| DS01 | -0.01 | -0.378 |
| DS02 | 0.2 | -0.6 |
| DS04 | 0.129 | -0.156 |
| DS0c | 0.416 | -1.062 |
| GP01 | 1.214 | -1.117 |
| GP02 | 1.65 | -0.133 |
| GP0c | 0.68 | 0.056 |
| NOD | -0.76 | 0.104 |
| NZO | 0.036 | -0.998 |
| PWK | 0.063 | -1.091 |
| H37Rv_KO_CtpC | -0.248 | -1.514 |
| H37Rv_KO_CtpD | -2.98 | -0.918 |
| H37Rv_KO_Rv1272 | -0.39 | -0.198 |
| H37Rv_KO_SugABC | -1.097 | 0.517 |
| H37Rv_KO_MbtN | -1.025 | -2.206 |
| Trans05 | 0.152 | 0.177 |
| macrophage_unactivated | 1.297 | 0.145 |
| IL1 | 1.536 | 0.899 |
| Rapamycin | 0.865 | 0.813 |
| Tcell | 1.87 | 1.342 |
| GMCSF | 0.449 | -0.19 |
| IFNab | 0.729 | 0.559 |
| IFNg | 0.171 | 0.959 |
| IFNg_GMCSF1 | 2.262 | 0.742 |
| Rv1432_day32 | 0.249 | 0.707 |
| Rv1565c_day32 | 1.652 | 1.54 |
| secA2_input | -1.565 | 1.39 |
| delta_Rv3594 | -0.968 | -0.881 |
| delta_Rv3717 | -0.396 | -0.839 |
| delta_Rv3811 | 0.079 | 0.342 |
| delta_Rv0954 | 0.738 | 0.037 |
| PonA1 | 0.299 | -0.446 |
| EccD1_KO | 1.799 | 1.536 |
| EspI_KO | 1.517 | 1.138 |
| PE35_KO | 2.252 | -0.306 |
| PPE68_KO | 1.987 | 0.422 |
| glycerol2 | 0.025 | -0.331 |
| lignocerate | -0.565 | -0.887 |
| oleate | 0.496 | 0.641 |
| phosphatidylcholine | 0.013 | -0.265 |
| acetate | -1.275 | -1.012 |
| glucAc | -1.298 | -1.882 |
| Rv0950ko | -0.274 | -0.184 |
| Rv1096ko | 0.872 | -0.856 |
| Rv3684ko | -1.618 | -0.999 |
| delta_otsA_trehalose | -0.087 | 0.004 |