Top 10 genes with highest correlation to Rv2994/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1318c/- | (cc=0.5048) | info on Rv1318c/- |
| Rv2701c/suhB | (cc=0.4907) | info on Rv2701c/suhB |
| Rv0036c/- | (cc=0.4744) | info on Rv0036c/- |
| Rv2771c/- | (cc=0.471) | info on Rv2771c/- |
| Rv3714c/- | (cc=0.4678) | info on Rv3714c/- |
| Rv3444c/esxT | (cc=0.4664) | info on Rv3444c/esxT |
| Rv3733c/- | (cc=0.4664) | info on Rv3733c/- |
| Rv2319c/- | (cc=0.4652) | info on Rv2319c/- |
| Rv0372c/- | (cc=0.464) | info on Rv0372c/- |
| Rv0395/- | (cc=0.4579) | info on Rv0395/- |
Correlation of Rv2994/- with Rv3444c/esxT
Normalized LFCs for Rv2994/-:
(description and provenance of datasets)
| Rv2994/- | Rv3444c/esxT | |
| Fe_supp_jason_reseq | -0.358 | -0.077 |
| low_pH_jason_reseq | -0.865 | 0.0 |
| NO_jason_reseq | -0.074 | 0.123 |
| B6_jason_reseq | 0.503 | 0.136 |
| MHCII_jason_reseq | 0.585 | 0.72 |
| Isoniazid02 | 0.192 | 0.343 |
| Rifampicin4 | 0.72 | -0.219 |
| Ethambutol3 | 0.413 | -0.315 |
| Meropenem3 | 0.207 | 0.047 |
| Vancomycin16 | 0.531 | 0.446 |
| Rv2680_day32 | -0.56 | -1.002 |
| H37Rv_KO_MarP | 0.099 | 0.317 |
| hypoxia_3wks | 0.335 | 0.311 |
| hypoxia_6wks | 0.695 | 0.461 |
| glycerol | -0.278 | -0.506 |
| cholesterol | -0.106 | -0.332 |
| AJ | 0.131 | -1.54 |
| Bibs02 | -0.012 | 1.068 |
| Bibs02c | 0.45 | -0.697 |
| BL6 | 0.603 | -1.834 |
| BL6a | 0.363 | -0.344 |
| BXD01 | -0.321 | -0.217 |
| BXD010 | -0.158 | -1.091 |
| BXD011 | 0.293 | 0.576 |
| BXD03 | -0.026 | 0.502 |
| BXD04 | -0.42 | -0.834 |
| BXD05 | 0.398 | -1.03 |
| BXD06 | 0.009 | -0.424 |
| BXD07 | 0.144 | -1.059 |
| BXD08 | 0.222 | -0.412 |
| BXD09 | -0.009 | -0.125 |
| CAST | 0.143 | 0.454 |
| CCcont | -0.494 | -1.848 |
| DS01 | 0.419 | 0.329 |
| DS02 | -0.284 | -0.025 |
| DS04 | -0.142 | 0.25 |
| DS0c | 0.5 | -0.305 |
| GP01 | 0.516 | 0.712 |
| GP02 | 0.412 | -1.22 |
| GP0c | -0.141 | -1.345 |
| NOD | 0.208 | 0.913 |
| NZO | -0.16 | -0.267 |
| PWK | 0.182 | -2.391 |
| H37Rv_KO_CtpC | -0.064 | -1.322 |
| H37Rv_KO_CtpD | -0.251 | 0.773 |
| H37Rv_KO_Rv1272 | -0.968 | -3.687 |
| H37Rv_KO_SugABC | 1.032 | 1.172 |
| H37Rv_KO_MbtN | -1.404 | -2.44 |
| Trans05 | -0.209 | -1.2 |
| macrophage_unactivated | -0.445 | -2.288 |
| IL1 | -0.047 | 0.756 |
| Rapamycin | -0.457 | -0.258 |
| Tcell | -0.782 | 0.257 |
| GMCSF | 0.821 | 0.874 |
| IFNab | -0.221 | 1.324 |
| IFNg | -0.353 | -1.026 |
| IFNg_GMCSF1 | -0.415 | 1.213 |
| Rv1432_day32 | 1.036 | -0.18 |
| Rv1565c_day32 | 0.294 | 1.06 |
| secA2_input | 0.614 | 0.352 |
| delta_Rv3594 | 0.167 | 0.0 |
| delta_Rv3717 | 0.118 | 0.425 |
| delta_Rv3811 | -0.123 | 0.446 |
| delta_Rv0954 | -0.021 | 0.249 |
| PonA1 | -0.575 | 0.19 |
| EccD1_KO | -0.109 | -1.033 |
| EspI_KO | 0.046 | -0.61 |
| PE35_KO | -0.61 | -0.449 |
| PPE68_KO | -0.106 | -0.384 |
| glycerol2 | -0.626 | -0.441 |
| lignocerate | -0.772 | -1.031 |
| oleate | -0.4 | 0.571 |
| phosphatidylcholine | -0.437 | -0.651 |
| acetate | -0.874 | -1.428 |
| glucAc | -1.191 | -3.777 |
| Rv0950ko | 0.048 | -1.951 |
| Rv1096ko | 0.832 | 1.095 |
| Rv3684ko | 0.452 | 0.701 |
| delta_otsA_trehalose | 1.026 | 0.372 |