Top 10 genes with highest correlation to Rv2994/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1318c/- | (cc=0.5048) | info on Rv1318c/- |
| Rv2701c/suhB | (cc=0.4907) | info on Rv2701c/suhB |
| Rv0036c/- | (cc=0.4744) | info on Rv0036c/- |
| Rv2771c/- | (cc=0.471) | info on Rv2771c/- |
| Rv3714c/- | (cc=0.4678) | info on Rv3714c/- |
| Rv3444c/esxT | (cc=0.4664) | info on Rv3444c/esxT |
| Rv3733c/- | (cc=0.4664) | info on Rv3733c/- |
| Rv2319c/- | (cc=0.4652) | info on Rv2319c/- |
| Rv0372c/- | (cc=0.464) | info on Rv0372c/- |
| Rv0395/- | (cc=0.4579) | info on Rv0395/- |
Correlation of Rv2994/- with Rv0395/-
Normalized LFCs for Rv2994/-:
(description and provenance of datasets)
| Rv2994/- | Rv0395/- | |
| Fe_supp_jason_reseq | -0.358 | -0.63 |
| low_pH_jason_reseq | -0.865 | 0.81 |
| NO_jason_reseq | -0.074 | 0.326 |
| B6_jason_reseq | 0.503 | 0.944 |
| MHCII_jason_reseq | 0.585 | 1.404 |
| Isoniazid02 | 0.192 | -0.051 |
| Rifampicin4 | 0.72 | -0.555 |
| Ethambutol3 | 0.413 | -0.855 |
| Meropenem3 | 0.207 | 0.455 |
| Vancomycin16 | 0.531 | -0.414 |
| Rv2680_day32 | -0.56 | 0.366 |
| H37Rv_KO_MarP | 0.099 | 0.246 |
| hypoxia_3wks | 0.335 | 1.009 |
| hypoxia_6wks | 0.695 | 0.121 |
| glycerol | -0.278 | -2.722 |
| cholesterol | -0.106 | -1.903 |
| AJ | 0.131 | 0.119 |
| Bibs02 | -0.012 | 0.559 |
| Bibs02c | 0.45 | 0.691 |
| BL6 | 0.603 | 0.121 |
| BL6a | 0.363 | 0.276 |
| BXD01 | -0.321 | 0.301 |
| BXD010 | -0.158 | -0.734 |
| BXD011 | 0.293 | 0.0 |
| BXD03 | -0.026 | 0.082 |
| BXD04 | -0.42 | -1.06 |
| BXD05 | 0.398 | -0.053 |
| BXD06 | 0.009 | 0.158 |
| BXD07 | 0.144 | -0.412 |
| BXD08 | 0.222 | -0.032 |
| BXD09 | -0.009 | -0.171 |
| CAST | 0.143 | -0.067 |
| CCcont | -0.494 | -0.856 |
| DS01 | 0.419 | -0.034 |
| DS02 | -0.284 | 0.274 |
| DS04 | -0.142 | 0.457 |
| DS0c | 0.5 | -1.037 |
| GP01 | 0.516 | -1.749 |
| GP02 | 0.412 | 0.091 |
| GP0c | -0.141 | -1.158 |
| NOD | 0.208 | 0.622 |
| NZO | -0.16 | 0.192 |
| PWK | 0.182 | 0.198 |
| H37Rv_KO_CtpC | -0.064 | -0.155 |
| H37Rv_KO_CtpD | -0.251 | -1.412 |
| H37Rv_KO_Rv1272 | -0.968 | -1.496 |
| H37Rv_KO_SugABC | 1.032 | -0.387 |
| H37Rv_KO_MbtN | -1.404 | -2.332 |
| Trans05 | -0.209 | 0.436 |
| macrophage_unactivated | -0.445 | -0.341 |
| IL1 | -0.047 | 0.225 |
| Rapamycin | -0.457 | -1.353 |
| Tcell | -0.782 | 0.192 |
| GMCSF | 0.821 | -0.092 |
| IFNab | -0.221 | -0.647 |
| IFNg | -0.353 | 0.203 |
| IFNg_GMCSF1 | -0.415 | -0.427 |
| Rv1432_day32 | 1.036 | 2.241 |
| Rv1565c_day32 | 0.294 | 0.49 |
| secA2_input | 0.614 | 0.831 |
| delta_Rv3594 | 0.167 | 1.152 |
| delta_Rv3717 | 0.118 | 0.415 |
| delta_Rv3811 | -0.123 | 0.232 |
| delta_Rv0954 | -0.021 | 1.644 |
| PonA1 | -0.575 | 0.201 |
| EccD1_KO | -0.109 | 0.898 |
| EspI_KO | 0.046 | -0.83 |
| PE35_KO | -0.61 | -0.038 |
| PPE68_KO | -0.106 | 0.08 |
| glycerol2 | -0.626 | -1.607 |
| lignocerate | -0.772 | -1.677 |
| oleate | -0.4 | -1.007 |
| phosphatidylcholine | -0.437 | -1.542 |
| acetate | -0.874 | -3.157 |
| glucAc | -1.191 | -1.405 |
| Rv0950ko | 0.048 | -0.133 |
| Rv1096ko | 0.832 | 0.691 |
| Rv3684ko | 0.452 | -0.557 |
| delta_otsA_trehalose | 1.026 | -0.286 |