Top 10 genes with highest correlation to Rv2994/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1318c/- | (cc=0.5048) | info on Rv1318c/- |
| Rv2701c/suhB | (cc=0.4907) | info on Rv2701c/suhB |
| Rv0036c/- | (cc=0.4744) | info on Rv0036c/- |
| Rv2771c/- | (cc=0.471) | info on Rv2771c/- |
| Rv3714c/- | (cc=0.4678) | info on Rv3714c/- |
| Rv3444c/esxT | (cc=0.4664) | info on Rv3444c/esxT |
| Rv3733c/- | (cc=0.4664) | info on Rv3733c/- |
| Rv2319c/- | (cc=0.4652) | info on Rv2319c/- |
| Rv0372c/- | (cc=0.464) | info on Rv0372c/- |
| Rv0395/- | (cc=0.4579) | info on Rv0395/- |
Correlation of Rv2994/- with Rv2701c/suhB
Normalized LFCs for Rv2994/-:
(description and provenance of datasets)
| Rv2994/- | Rv2701c/suhB | |
| Fe_supp_jason_reseq | -0.358 | -1.904 |
| low_pH_jason_reseq | -0.865 | -1.004 |
| NO_jason_reseq | -0.074 | -0.163 |
| B6_jason_reseq | 0.503 | -0.536 |
| MHCII_jason_reseq | 0.585 | -0.453 |
| Isoniazid02 | 0.192 | 0.26 |
| Rifampicin4 | 0.72 | 0.322 |
| Ethambutol3 | 0.413 | 0.946 |
| Meropenem3 | 0.207 | 1.804 |
| Vancomycin16 | 0.531 | 0.34 |
| Rv2680_day32 | -0.56 | -0.475 |
| H37Rv_KO_MarP | 0.099 | -0.134 |
| hypoxia_3wks | 0.335 | -0.722 |
| hypoxia_6wks | 0.695 | -0.284 |
| glycerol | -0.278 | 0.325 |
| cholesterol | -0.106 | 1.235 |
| AJ | 0.131 | -0.141 |
| Bibs02 | -0.012 | 0.23 |
| Bibs02c | 0.45 | 0.105 |
| BL6 | 0.603 | 0.31 |
| BL6a | 0.363 | -0.433 |
| BXD01 | -0.321 | -1.354 |
| BXD010 | -0.158 | -0.149 |
| BXD011 | 0.293 | -0.959 |
| BXD03 | -0.026 | -0.57 |
| BXD04 | -0.42 | -0.37 |
| BXD05 | 0.398 | -0.727 |
| BXD06 | 0.009 | -0.571 |
| BXD07 | 0.144 | 0.14 |
| BXD08 | 0.222 | -0.65 |
| BXD09 | -0.009 | -0.816 |
| CAST | 0.143 | 0.499 |
| CCcont | -0.494 | -1.223 |
| DS01 | 0.419 | -0.448 |
| DS02 | -0.284 | -0.413 |
| DS04 | -0.142 | -0.176 |
| DS0c | 0.5 | -0.025 |
| GP01 | 0.516 | 1.237 |
| GP02 | 0.412 | 1.199 |
| GP0c | -0.141 | -0.222 |
| NOD | 0.208 | 0.493 |
| NZO | -0.16 | -0.577 |
| PWK | 0.182 | 0.475 |
| H37Rv_KO_CtpC | -0.064 | -1.403 |
| H37Rv_KO_CtpD | -0.251 | -1.06 |
| H37Rv_KO_Rv1272 | -0.968 | -1.481 |
| H37Rv_KO_SugABC | 1.032 | -0.441 |
| H37Rv_KO_MbtN | -1.404 | -0.927 |
| Trans05 | -0.209 | -0.236 |
| macrophage_unactivated | -0.445 | -1.979 |
| IL1 | -0.047 | -0.35 |
| Rapamycin | -0.457 | -0.193 |
| Tcell | -0.782 | -1.916 |
| GMCSF | 0.821 | -0.863 |
| IFNab | -0.221 | -1.128 |
| IFNg | -0.353 | 0.251 |
| IFNg_GMCSF1 | -0.415 | -0.405 |
| Rv1432_day32 | 1.036 | -0.639 |
| Rv1565c_day32 | 0.294 | -0.325 |
| secA2_input | 0.614 | 0.85 |
| delta_Rv3594 | 0.167 | -0.337 |
| delta_Rv3717 | 0.118 | 0.413 |
| delta_Rv3811 | -0.123 | -0.247 |
| delta_Rv0954 | -0.021 | -0.509 |
| PonA1 | -0.575 | 0.13 |
| EccD1_KO | -0.109 | 0.829 |
| EspI_KO | 0.046 | 1.446 |
| PE35_KO | -0.61 | 0.032 |
| PPE68_KO | -0.106 | -0.544 |
| glycerol2 | -0.626 | -0.75 |
| lignocerate | -0.772 | -1.076 |
| oleate | -0.4 | -0.298 |
| phosphatidylcholine | -0.437 | -0.926 |
| acetate | -0.874 | -1.709 |
| glucAc | -1.191 | -1.251 |
| Rv0950ko | 0.048 | 0.181 |
| Rv1096ko | 0.832 | 1.252 |
| Rv3684ko | 0.452 | 1.238 |
| delta_otsA_trehalose | 1.026 | 0.972 |