Top 10 genes with highest correlation to Rv2994/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1318c/- | (cc=0.5048) | info on Rv1318c/- |
| Rv2701c/suhB | (cc=0.4907) | info on Rv2701c/suhB |
| Rv0036c/- | (cc=0.4744) | info on Rv0036c/- |
| Rv2771c/- | (cc=0.471) | info on Rv2771c/- |
| Rv3714c/- | (cc=0.4678) | info on Rv3714c/- |
| Rv3444c/esxT | (cc=0.4664) | info on Rv3444c/esxT |
| Rv3733c/- | (cc=0.4664) | info on Rv3733c/- |
| Rv2319c/- | (cc=0.4652) | info on Rv2319c/- |
| Rv0372c/- | (cc=0.464) | info on Rv0372c/- |
| Rv0395/- | (cc=0.4579) | info on Rv0395/- |
Correlation of Rv2994/- with Rv1318c/-
Normalized LFCs for Rv2994/-:
(description and provenance of datasets)
| Rv2994/- | Rv1318c/- | |
| Fe_supp_jason_reseq | -0.358 | 0.455 |
| low_pH_jason_reseq | -0.865 | -0.39 |
| NO_jason_reseq | -0.074 | -0.328 |
| B6_jason_reseq | 0.503 | 0.078 |
| MHCII_jason_reseq | 0.585 | 0.344 |
| Isoniazid02 | 0.192 | 0.14 |
| Rifampicin4 | 0.72 | 0.839 |
| Ethambutol3 | 0.413 | 1.351 |
| Meropenem3 | 0.207 | 0.077 |
| Vancomycin16 | 0.531 | 0.395 |
| Rv2680_day32 | -0.56 | -0.489 |
| H37Rv_KO_MarP | 0.099 | 0.262 |
| hypoxia_3wks | 0.335 | 0.191 |
| hypoxia_6wks | 0.695 | 0.209 |
| glycerol | -0.278 | -0.453 |
| cholesterol | -0.106 | -0.103 |
| AJ | 0.131 | -0.212 |
| Bibs02 | -0.012 | 0.412 |
| Bibs02c | 0.45 | 0.039 |
| BL6 | 0.603 | -0.335 |
| BL6a | 0.363 | -0.174 |
| BXD01 | -0.321 | -0.317 |
| BXD010 | -0.158 | 0.178 |
| BXD011 | 0.293 | 0.21 |
| BXD03 | -0.026 | -0.021 |
| BXD04 | -0.42 | -0.453 |
| BXD05 | 0.398 | -0.016 |
| BXD06 | 0.009 | -0.392 |
| BXD07 | 0.144 | 0.261 |
| BXD08 | 0.222 | -0.094 |
| BXD09 | -0.009 | -0.011 |
| CAST | 0.143 | 0.087 |
| CCcont | -0.494 | -0.899 |
| DS01 | 0.419 | 0.496 |
| DS02 | -0.284 | -0.145 |
| DS04 | -0.142 | 0.218 |
| DS0c | 0.5 | -0.085 |
| GP01 | 0.516 | 0.472 |
| GP02 | 0.412 | -0.571 |
| GP0c | -0.141 | -0.103 |
| NOD | 0.208 | 0.457 |
| NZO | -0.16 | -0.182 |
| PWK | 0.182 | -0.254 |
| H37Rv_KO_CtpC | -0.064 | 0.337 |
| H37Rv_KO_CtpD | -0.251 | 0.703 |
| H37Rv_KO_Rv1272 | -0.968 | -0.635 |
| H37Rv_KO_SugABC | 1.032 | -0.507 |
| H37Rv_KO_MbtN | -1.404 | -0.502 |
| Trans05 | -0.209 | -0.514 |
| macrophage_unactivated | -0.445 | -0.502 |
| IL1 | -0.047 | -0.181 |
| Rapamycin | -0.457 | -0.015 |
| Tcell | -0.782 | -0.59 |
| GMCSF | 0.821 | 0.066 |
| IFNab | -0.221 | -0.281 |
| IFNg | -0.353 | 0.182 |
| IFNg_GMCSF1 | -0.415 | 0.506 |
| Rv1432_day32 | 1.036 | 0.671 |
| Rv1565c_day32 | 0.294 | -0.438 |
| secA2_input | 0.614 | -0.067 |
| delta_Rv3594 | 0.167 | -0.046 |
| delta_Rv3717 | 0.118 | -0.498 |
| delta_Rv3811 | -0.123 | 0.375 |
| delta_Rv0954 | -0.021 | -0.443 |
| PonA1 | -0.575 | -0.557 |
| EccD1_KO | -0.109 | -0.204 |
| EspI_KO | 0.046 | -0.2 |
| PE35_KO | -0.61 | 0.0 |
| PPE68_KO | -0.106 | -0.378 |
| glycerol2 | -0.626 | -0.775 |
| lignocerate | -0.772 | -0.744 |
| oleate | -0.4 | -0.264 |
| phosphatidylcholine | -0.437 | -0.399 |
| acetate | -0.874 | -0.796 |
| glucAc | -1.191 | -0.962 |
| Rv0950ko | 0.048 | 1.116 |
| Rv1096ko | 0.832 | 0.676 |
| Rv3684ko | 0.452 | 0.976 |
| delta_otsA_trehalose | 1.026 | -0.243 |