Top 10 genes with highest correlation to Rv2946c/pks1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2942/mmpL7 | (cc=0.6788) | info on Rv2942/mmpL7 |
| Rv2945c/lppX | (cc=0.6517) | info on Rv2945c/lppX |
| Rv2936/drrA | (cc=0.5864) | info on Rv2936/drrA |
| Rv1109c/- | (cc=0.5669) | info on Rv1109c/- |
| Rv3200c/- | (cc=0.5456) | info on Rv3200c/- |
| Rv2937/drrB | (cc=0.5327) | info on Rv2937/drrB |
| Rv2938/drrC | (cc=0.5147) | info on Rv2938/drrC |
| Rv2218/lipA | (cc=0.5122) | info on Rv2218/lipA |
| Rv2498c/citE | (cc=0.5091) | info on Rv2498c/citE |
| Rv1829/- | (cc=0.5077) | info on Rv1829/- |
Correlation of Rv2946c/pks1 with Rv2938/drrC
Normalized LFCs for Rv2946c/pks1:
(description and provenance of datasets)
| Rv2946c/pks1 | Rv2938/drrC | |
| Fe_supp_jason_reseq | 0.14 | 0.434 |
| low_pH_jason_reseq | -0.903 | 1.402 |
| NO_jason_reseq | -0.987 | -2.788 |
| B6_jason_reseq | -0.23 | -1.025 |
| MHCII_jason_reseq | -0.172 | -1.658 |
| Isoniazid02 | -0.068 | -1.053 |
| Rifampicin4 | -0.171 | -1.836 |
| Ethambutol3 | 0.705 | -0.187 |
| Meropenem3 | 0.303 | -0.414 |
| Vancomycin16 | -0.082 | -1.722 |
| Rv2680_day32 | -1.387 | -2.522 |
| H37Rv_KO_MarP | -0.703 | -3.032 |
| hypoxia_3wks | 1.168 | 2.508 |
| hypoxia_6wks | 1.247 | 2.721 |
| glycerol | 0.455 | 0.611 |
| cholesterol | 0.541 | 2.289 |
| AJ | -0.968 | -3.787 |
| Bibs02 | 0.162 | -1.285 |
| Bibs02c | 0.135 | -0.964 |
| BL6 | -0.149 | 0.343 |
| BL6a | 0.039 | 0.072 |
| BXD01 | 0.222 | 0.999 |
| BXD010 | -0.079 | 0.721 |
| BXD011 | 0.074 | 1.051 |
| BXD03 | 0.253 | 0.185 |
| BXD04 | 0.486 | 0.653 |
| BXD05 | -0.083 | 0.472 |
| BXD06 | 0.009 | 0.536 |
| BXD07 | 0.036 | 0.737 |
| BXD08 | 0.473 | 0.63 |
| BXD09 | -0.047 | 0.051 |
| CAST | -1.078 | -2.257 |
| CCcont | 0.329 | 1.192 |
| DS01 | 0.015 | 0.068 |
| DS02 | -0.358 | 0.446 |
| DS04 | 0.298 | -1.178 |
| DS0c | -0.291 | 0.154 |
| GP01 | 0.518 | -1.24 |
| GP02 | -0.051 | -1.711 |
| GP0c | 0.399 | 0.913 |
| NOD | -1.245 | -1.852 |
| NZO | -1.039 | -2.875 |
| PWK | -0.838 | -2.663 |
| H37Rv_KO_CtpC | -0.181 | -0.111 |
| H37Rv_KO_CtpD | 0.05 | -0.116 |
| H37Rv_KO_Rv1272 | -0.418 | 0.634 |
| H37Rv_KO_SugABC | 0.841 | 1.366 |
| H37Rv_KO_MbtN | 0.494 | 1.331 |
| Trans05 | -0.155 | 1.191 |
| macrophage_unactivated | 0.259 | -0.167 |
| IL1 | 0.43 | -0.504 |
| Rapamycin | 0.528 | -1.338 |
| Tcell | 0.694 | 2.848 |
| GMCSF | 0.177 | -3.174 |
| IFNab | 0.877 | -0.206 |
| IFNg | -0.061 | -4.348 |
| IFNg_GMCSF1 | -0.025 | -4.141 |
| Rv1432_day32 | -0.947 | -4.85 |
| Rv1565c_day32 | -0.253 | -4.634 |
| secA2_input | -0.39 | -1.23 |
| delta_Rv3594 | 0.639 | -1.296 |
| delta_Rv3717 | 0.094 | -1.417 |
| delta_Rv3811 | 0.634 | -1.5 |
| delta_Rv0954 | 0.592 | -1.472 |
| PonA1 | 0.248 | -1.151 |
| EccD1_KO | -0.214 | 0.27 |
| EspI_KO | 0.325 | 0.191 |
| PE35_KO | -0.053 | 0.195 |
| PPE68_KO | -0.029 | 0.307 |
| glycerol2 | 0.0 | 0.071 |
| lignocerate | -0.195 | 0.192 |
| oleate | 0.121 | -0.308 |
| phosphatidylcholine | 0.041 | 0.256 |
| acetate | -0.564 | -0.178 |
| glucAc | -0.461 | 0.006 |
| Rv0950ko | 0.181 | -0.615 |
| Rv1096ko | 0.027 | 0.648 |
| Rv3684ko | -0.354 | -0.38 |
| delta_otsA_trehalose | -0.527 | -0.24 |