Top 10 genes with highest correlation to Rv2946c/pks1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2942/mmpL7 | (cc=0.6788) | info on Rv2942/mmpL7 |
| Rv2945c/lppX | (cc=0.6517) | info on Rv2945c/lppX |
| Rv2936/drrA | (cc=0.5864) | info on Rv2936/drrA |
| Rv1109c/- | (cc=0.5669) | info on Rv1109c/- |
| Rv3200c/- | (cc=0.5456) | info on Rv3200c/- |
| Rv2937/drrB | (cc=0.5327) | info on Rv2937/drrB |
| Rv2938/drrC | (cc=0.5147) | info on Rv2938/drrC |
| Rv2218/lipA | (cc=0.5122) | info on Rv2218/lipA |
| Rv2498c/citE | (cc=0.5091) | info on Rv2498c/citE |
| Rv1829/- | (cc=0.5077) | info on Rv1829/- |
Correlation of Rv2946c/pks1 with Rv2498c/citE
Normalized LFCs for Rv2946c/pks1:
(description and provenance of datasets)
| Rv2946c/pks1 | Rv2498c/citE | |
| Fe_supp_jason_reseq | 0.14 | 0.911 |
| low_pH_jason_reseq | -0.903 | 0.0 |
| NO_jason_reseq | -0.987 | -0.126 |
| B6_jason_reseq | -0.23 | -2.356 |
| MHCII_jason_reseq | -0.172 | -1.001 |
| Isoniazid02 | -0.068 | 0.739 |
| Rifampicin4 | -0.171 | -0.187 |
| Ethambutol3 | 0.705 | 0.302 |
| Meropenem3 | 0.303 | 0.49 |
| Vancomycin16 | -0.082 | 0.708 |
| Rv2680_day32 | -1.387 | -2.687 |
| H37Rv_KO_MarP | -0.703 | 0.395 |
| hypoxia_3wks | 1.168 | 0.231 |
| hypoxia_6wks | 1.247 | -0.424 |
| glycerol | 0.455 | 0.385 |
| cholesterol | 0.541 | 0.171 |
| AJ | -0.968 | -2.973 |
| Bibs02 | 0.162 | -0.699 |
| Bibs02c | 0.135 | -3.378 |
| BL6 | -0.149 | -1.795 |
| BL6a | 0.039 | -2.538 |
| BXD01 | 0.222 | -1.038 |
| BXD010 | -0.079 | 0.018 |
| BXD011 | 0.074 | -1.093 |
| BXD03 | 0.253 | -0.924 |
| BXD04 | 0.486 | -0.071 |
| BXD05 | -0.083 | -2.087 |
| BXD06 | 0.009 | -1.188 |
| BXD07 | 0.036 | -1.233 |
| BXD08 | 0.473 | -1.228 |
| BXD09 | -0.047 | -1.501 |
| CAST | -1.078 | -3.065 |
| CCcont | 0.329 | 0.021 |
| DS01 | 0.015 | -1.432 |
| DS02 | -0.358 | -1.545 |
| DS04 | 0.298 | -1.727 |
| DS0c | -0.291 | -2.401 |
| GP01 | 0.518 | -0.482 |
| GP02 | -0.051 | -1.524 |
| GP0c | 0.399 | -0.094 |
| NOD | -1.245 | -1.476 |
| NZO | -1.039 | -2.464 |
| PWK | -0.838 | -2.514 |
| H37Rv_KO_CtpC | -0.181 | -1.446 |
| H37Rv_KO_CtpD | 0.05 | -0.537 |
| H37Rv_KO_Rv1272 | -0.418 | -2.583 |
| H37Rv_KO_SugABC | 0.841 | -0.789 |
| H37Rv_KO_MbtN | 0.494 | -0.821 |
| Trans05 | -0.155 | -2.503 |
| macrophage_unactivated | 0.259 | 0.928 |
| IL1 | 0.43 | 1.145 |
| Rapamycin | 0.528 | 0.902 |
| Tcell | 0.694 | 1.372 |
| GMCSF | 0.177 | 0.826 |
| IFNab | 0.877 | 1.769 |
| IFNg | -0.061 | 0.241 |
| IFNg_GMCSF1 | -0.025 | 0.484 |
| Rv1432_day32 | -0.947 | -2.117 |
| Rv1565c_day32 | -0.253 | -2.924 |
| secA2_input | -0.39 | -0.632 |
| delta_Rv3594 | 0.639 | 0.026 |
| delta_Rv3717 | 0.094 | 0.083 |
| delta_Rv3811 | 0.634 | 0.845 |
| delta_Rv0954 | 0.592 | 0.394 |
| PonA1 | 0.248 | 0.185 |
| EccD1_KO | -0.214 | 1.398 |
| EspI_KO | 0.325 | 1.3 |
| PE35_KO | -0.053 | 1.286 |
| PPE68_KO | -0.029 | 1.312 |
| glycerol2 | 0.0 | -0.932 |
| lignocerate | -0.195 | -1.34 |
| oleate | 0.121 | 0.839 |
| phosphatidylcholine | 0.041 | -0.095 |
| acetate | -0.564 | -1.578 |
| glucAc | -0.461 | -2.06 |
| Rv0950ko | 0.181 | 0.416 |
| Rv1096ko | 0.027 | 1.197 |
| Rv3684ko | -0.354 | 0.593 |
| delta_otsA_trehalose | -0.527 | -4.686 |