Top 10 genes with highest correlation to Rv2946c/pks1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2942/mmpL7 | (cc=0.6788) | info on Rv2942/mmpL7 |
| Rv2945c/lppX | (cc=0.6517) | info on Rv2945c/lppX |
| Rv2936/drrA | (cc=0.5864) | info on Rv2936/drrA |
| Rv1109c/- | (cc=0.5669) | info on Rv1109c/- |
| Rv3200c/- | (cc=0.5456) | info on Rv3200c/- |
| Rv2937/drrB | (cc=0.5327) | info on Rv2937/drrB |
| Rv2938/drrC | (cc=0.5147) | info on Rv2938/drrC |
| Rv2218/lipA | (cc=0.5122) | info on Rv2218/lipA |
| Rv2498c/citE | (cc=0.5091) | info on Rv2498c/citE |
| Rv1829/- | (cc=0.5077) | info on Rv1829/- |
Correlation of Rv2946c/pks1 with Rv2937/drrB
Normalized LFCs for Rv2946c/pks1:
(description and provenance of datasets)
| Rv2946c/pks1 | Rv2937/drrB | |
| Fe_supp_jason_reseq | 0.14 | 0.259 |
| low_pH_jason_reseq | -0.903 | 0.93 |
| NO_jason_reseq | -0.987 | -2.77 |
| B6_jason_reseq | -0.23 | -1.599 |
| MHCII_jason_reseq | -0.172 | -1.823 |
| Isoniazid02 | -0.068 | 0.172 |
| Rifampicin4 | -0.171 | -0.328 |
| Ethambutol3 | 0.705 | 0.353 |
| Meropenem3 | 0.303 | 0.99 |
| Vancomycin16 | -0.082 | -0.462 |
| Rv2680_day32 | -1.387 | -2.235 |
| H37Rv_KO_MarP | -0.703 | -2.698 |
| hypoxia_3wks | 1.168 | 2.149 |
| hypoxia_6wks | 1.247 | 2.353 |
| glycerol | 0.455 | -0.799 |
| cholesterol | 0.541 | 1.802 |
| AJ | -0.968 | -3.817 |
| Bibs02 | 0.162 | -0.827 |
| Bibs02c | 0.135 | -0.828 |
| BL6 | -0.149 | 1.228 |
| BL6a | 0.039 | -0.175 |
| BXD01 | 0.222 | 1.26 |
| BXD010 | -0.079 | 1.349 |
| BXD011 | 0.074 | 0.599 |
| BXD03 | 0.253 | 0.56 |
| BXD04 | 0.486 | 0.761 |
| BXD05 | -0.083 | 0.201 |
| BXD06 | 0.009 | 0.586 |
| BXD07 | 0.036 | 0.396 |
| BXD08 | 0.473 | 1.188 |
| BXD09 | -0.047 | 0.186 |
| CAST | -1.078 | -1.872 |
| CCcont | 0.329 | 1.677 |
| DS01 | 0.015 | -0.358 |
| DS02 | -0.358 | -0.354 |
| DS04 | 0.298 | -1.054 |
| DS0c | -0.291 | -0.041 |
| GP01 | 0.518 | -1.538 |
| GP02 | -0.051 | -1.8 |
| GP0c | 0.399 | 0.547 |
| NOD | -1.245 | -1.606 |
| NZO | -1.039 | -2.659 |
| PWK | -0.838 | -2.899 |
| H37Rv_KO_CtpC | -0.181 | -0.807 |
| H37Rv_KO_CtpD | 0.05 | -0.688 |
| H37Rv_KO_Rv1272 | -0.418 | 0.792 |
| H37Rv_KO_SugABC | 0.841 | 1.115 |
| H37Rv_KO_MbtN | 0.494 | 1.261 |
| Trans05 | -0.155 | 1.007 |
| macrophage_unactivated | 0.259 | 0.278 |
| IL1 | 0.43 | -0.015 |
| Rapamycin | 0.528 | -1.0 |
| Tcell | 0.694 | 3.506 |
| GMCSF | 0.177 | -2.96 |
| IFNab | 0.877 | -1.279 |
| IFNg | -0.061 | -4.105 |
| IFNg_GMCSF1 | -0.025 | -4.267 |
| Rv1432_day32 | -0.947 | -4.562 |
| Rv1565c_day32 | -0.253 | -4.958 |
| secA2_input | -0.39 | -1.199 |
| delta_Rv3594 | 0.639 | -1.011 |
| delta_Rv3717 | 0.094 | -1.031 |
| delta_Rv3811 | 0.634 | -0.669 |
| delta_Rv0954 | 0.592 | -0.727 |
| PonA1 | 0.248 | -0.791 |
| EccD1_KO | -0.214 | -0.779 |
| EspI_KO | 0.325 | 0.185 |
| PE35_KO | -0.053 | -0.948 |
| PPE68_KO | -0.029 | -0.909 |
| glycerol2 | 0.0 | 0.472 |
| lignocerate | -0.195 | 0.416 |
| oleate | 0.121 | 0.51 |
| phosphatidylcholine | 0.041 | 0.58 |
| acetate | -0.564 | -0.786 |
| glucAc | -0.461 | -0.3 |
| Rv0950ko | 0.181 | -0.458 |
| Rv1096ko | 0.027 | 0.163 |
| Rv3684ko | -0.354 | -0.301 |
| delta_otsA_trehalose | -0.527 | -0.808 |