Top 10 genes with highest correlation to Rv2946c/pks1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2942/mmpL7 | (cc=0.6788) | info on Rv2942/mmpL7 |
| Rv2945c/lppX | (cc=0.6517) | info on Rv2945c/lppX |
| Rv2936/drrA | (cc=0.5864) | info on Rv2936/drrA |
| Rv1109c/- | (cc=0.5669) | info on Rv1109c/- |
| Rv3200c/- | (cc=0.5456) | info on Rv3200c/- |
| Rv2937/drrB | (cc=0.5327) | info on Rv2937/drrB |
| Rv2938/drrC | (cc=0.5147) | info on Rv2938/drrC |
| Rv2218/lipA | (cc=0.5122) | info on Rv2218/lipA |
| Rv2498c/citE | (cc=0.5091) | info on Rv2498c/citE |
| Rv1829/- | (cc=0.5077) | info on Rv1829/- |
Correlation of Rv2946c/pks1 with Rv2942/mmpL7
Normalized LFCs for Rv2946c/pks1:
(description and provenance of datasets)
| Rv2946c/pks1 | Rv2942/mmpL7 | |
| Fe_supp_jason_reseq | 0.14 | 0.748 |
| low_pH_jason_reseq | -0.903 | -0.038 |
| NO_jason_reseq | -0.987 | -3.426 |
| B6_jason_reseq | -0.23 | -2.051 |
| MHCII_jason_reseq | -0.172 | -0.87 |
| Isoniazid02 | -0.068 | -0.221 |
| Rifampicin4 | -0.171 | -0.062 |
| Ethambutol3 | 0.705 | -0.114 |
| Meropenem3 | 0.303 | 0.189 |
| Vancomycin16 | -0.082 | -0.658 |
| Rv2680_day32 | -1.387 | -1.435 |
| H37Rv_KO_MarP | -0.703 | -2.139 |
| hypoxia_3wks | 1.168 | 2.895 |
| hypoxia_6wks | 1.247 | 2.733 |
| glycerol | 0.455 | 0.018 |
| cholesterol | 0.541 | 2.147 |
| AJ | -0.968 | -3.425 |
| Bibs02 | 0.162 | -0.694 |
| Bibs02c | 0.135 | -0.767 |
| BL6 | -0.149 | -0.321 |
| BL6a | 0.039 | -0.999 |
| BXD01 | 0.222 | 0.407 |
| BXD010 | -0.079 | -0.469 |
| BXD011 | 0.074 | -0.844 |
| BXD03 | 0.253 | -0.46 |
| BXD04 | 0.486 | 0.482 |
| BXD05 | -0.083 | -0.963 |
| BXD06 | 0.009 | -0.489 |
| BXD07 | 0.036 | -0.718 |
| BXD08 | 0.473 | 0.653 |
| BXD09 | -0.047 | -0.956 |
| CAST | -1.078 | -2.367 |
| CCcont | 0.329 | 0.824 |
| DS01 | 0.015 | -0.804 |
| DS02 | -0.358 | -1.297 |
| DS04 | 0.298 | -0.867 |
| DS0c | -0.291 | -0.457 |
| GP01 | 0.518 | -0.441 |
| GP02 | -0.051 | -1.26 |
| GP0c | 0.399 | 1.833 |
| NOD | -1.245 | -2.662 |
| NZO | -1.039 | -2.202 |
| PWK | -0.838 | -2.498 |
| H37Rv_KO_CtpC | -0.181 | -1.593 |
| H37Rv_KO_CtpD | 0.05 | -0.907 |
| H37Rv_KO_Rv1272 | -0.418 | -0.191 |
| H37Rv_KO_SugABC | 0.841 | 1.311 |
| H37Rv_KO_MbtN | 0.494 | 0.718 |
| Trans05 | -0.155 | -0.548 |
| macrophage_unactivated | 0.259 | -0.372 |
| IL1 | 0.43 | -0.282 |
| Rapamycin | 0.528 | -0.918 |
| Tcell | 0.694 | 0.587 |
| GMCSF | 0.177 | -1.97 |
| IFNab | 0.877 | 0.819 |
| IFNg | -0.061 | -3.64 |
| IFNg_GMCSF1 | -0.025 | -2.944 |
| Rv1432_day32 | -0.947 | -4.892 |
| Rv1565c_day32 | -0.253 | -2.65 |
| secA2_input | -0.39 | -0.297 |
| delta_Rv3594 | 0.639 | 0.024 |
| delta_Rv3717 | 0.094 | -0.147 |
| delta_Rv3811 | 0.634 | 0.312 |
| delta_Rv0954 | 0.592 | -0.209 |
| PonA1 | 0.248 | -0.507 |
| EccD1_KO | -0.214 | 0.973 |
| EspI_KO | 0.325 | 0.907 |
| PE35_KO | -0.053 | 0.309 |
| PPE68_KO | -0.029 | 0.627 |
| glycerol2 | 0.0 | 0.394 |
| lignocerate | -0.195 | 0.138 |
| oleate | 0.121 | 0.319 |
| phosphatidylcholine | 0.041 | 0.431 |
| acetate | -0.564 | -0.158 |
| glucAc | -0.461 | 0.085 |
| Rv0950ko | 0.181 | -0.368 |
| Rv1096ko | 0.027 | 0.769 |
| Rv3684ko | -0.354 | -0.285 |
| delta_otsA_trehalose | -0.527 | -0.122 |