Top 10 genes with highest correlation to Rv2935/ppsE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2931/ppsA | (cc=0.9685) | info on Rv2931/ppsA |
| Rv2940c/mas | (cc=0.9663) | info on Rv2940c/mas |
| Rv2932/ppsB | (cc=0.9643) | info on Rv2932/ppsB |
| Rv2941/fadD28 | (cc=0.9605) | info on Rv2941/fadD28 |
| Rv2933/ppsC | (cc=0.9575) | info on Rv2933/ppsC |
| Rv2930/fadD26 | (cc=0.9545) | info on Rv2930/fadD26 |
| Rv2934/ppsD | (cc=0.9444) | info on Rv2934/ppsD |
| Rv2939/papA5 | (cc=0.9442) | info on Rv2939/papA5 |
| Rv2928/tesA | (cc=0.6841) | info on Rv2928/tesA |
| Rv3274c/fadE25 | (cc=0.5489) | info on Rv3274c/fadE25 |
Correlation of Rv2935/ppsE with Rv2934/ppsD
Normalized LFCs for Rv2935/ppsE:
(description and provenance of datasets)
| Rv2935/ppsE | Rv2934/ppsD | |
| Fe_supp_jason_reseq | 1.16 | 1.896 |
| low_pH_jason_reseq | 2.523 | 2.725 |
| NO_jason_reseq | -0.625 | -0.9 |
| B6_jason_reseq | 2.04 | 1.419 |
| MHCII_jason_reseq | -2.889 | -2.763 |
| Isoniazid02 | -0.095 | -0.485 |
| Rifampicin4 | 0.953 | 1.148 |
| Ethambutol3 | 0.67 | 1.229 |
| Meropenem3 | 0.156 | 0.38 |
| Vancomycin16 | 0.096 | 0.348 |
| Rv2680_day32 | -1.809 | -2.04 |
| H37Rv_KO_MarP | -0.435 | -0.586 |
| hypoxia_3wks | 0.451 | 0.538 |
| hypoxia_6wks | -0.503 | -0.461 |
| glycerol | 3.976 | 3.606 |
| cholesterol | 2.724 | 2.613 |
| AJ | 0.61 | 0.763 |
| Bibs02 | -2.987 | -3.155 |
| Bibs02c | -3.519 | -3.186 |
| BL6 | 0.422 | 0.639 |
| BL6a | -0.9 | -0.702 |
| BXD01 | 1.388 | 1.574 |
| BXD010 | -0.12 | 0.38 |
| BXD011 | -0.745 | -0.705 |
| BXD03 | -0.282 | 0.311 |
| BXD04 | 0.537 | 0.313 |
| BXD05 | -1.467 | -1.116 |
| BXD06 | 0.04 | 0.245 |
| BXD07 | -0.056 | 0.077 |
| BXD08 | 1.12 | 1.285 |
| BXD09 | -0.494 | -0.148 |
| CAST | 2.471 | 2.426 |
| CCcont | 1.244 | 1.244 |
| DS01 | 0.489 | 0.65 |
| DS02 | 1.027 | 1.621 |
| DS04 | -0.098 | 0.658 |
| DS0c | -0.179 | 0.151 |
| GP01 | -2.328 | -1.566 |
| GP02 | -1.886 | -1.57 |
| GP0c | -3.195 | -1.829 |
| NOD | 1.97 | 1.886 |
| NZO | 2.195 | 2.446 |
| PWK | -0.121 | 0.109 |
| H37Rv_KO_CtpC | -0.814 | 0.155 |
| H37Rv_KO_CtpD | -0.537 | -0.094 |
| H37Rv_KO_Rv1272 | -1.217 | -0.558 |
| H37Rv_KO_SugABC | 1.304 | 1.608 |
| H37Rv_KO_MbtN | 0.644 | 0.662 |
| Trans05 | -0.371 | 0.256 |
| macrophage_unactivated | 3.961 | 3.545 |
| IL1 | -2.572 | -2.394 |
| Rapamycin | -2.167 | -2.477 |
| Tcell | 3.829 | 3.812 |
| GMCSF | -2.519 | -2.376 |
| IFNab | -1.911 | -1.69 |
| IFNg | -3.659 | -2.959 |
| IFNg_GMCSF1 | -1.159 | -0.892 |
| Rv1432_day32 | -0.15 | -0.164 |
| Rv1565c_day32 | -0.199 | -1.579 |
| secA2_input | -0.581 | -0.659 |
| delta_Rv3594 | -2.158 | -3.624 |
| delta_Rv3717 | -2.386 | -2.427 |
| delta_Rv3811 | -2.37 | -3.353 |
| delta_Rv0954 | -2.076 | -2.671 |
| PonA1 | -1.394 | -2.113 |
| EccD1_KO | -3.545 | -3.003 |
| EspI_KO | -3.074 | -2.145 |
| PE35_KO | 1.631 | 1.96 |
| PPE68_KO | 0.118 | 0.669 |
| glycerol2 | 0.74 | 0.884 |
| lignocerate | 0.588 | 0.559 |
| oleate | 0.732 | 0.94 |
| phosphatidylcholine | 0.867 | 0.91 |
| acetate | -0.289 | -0.236 |
| glucAc | -0.328 | -0.259 |
| Rv0950ko | -4.282 | -3.344 |
| Rv1096ko | -5.799 | -4.083 |
| Rv3684ko | -3.223 | -2.459 |
| delta_otsA_trehalose | 2.809 | -0.55 |