Top 10 genes with highest correlation to Rv2935/ppsE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2931/ppsA | (cc=0.9685) | info on Rv2931/ppsA |
| Rv2940c/mas | (cc=0.9663) | info on Rv2940c/mas |
| Rv2932/ppsB | (cc=0.9643) | info on Rv2932/ppsB |
| Rv2941/fadD28 | (cc=0.9605) | info on Rv2941/fadD28 |
| Rv2933/ppsC | (cc=0.9575) | info on Rv2933/ppsC |
| Rv2930/fadD26 | (cc=0.9545) | info on Rv2930/fadD26 |
| Rv2934/ppsD | (cc=0.9444) | info on Rv2934/ppsD |
| Rv2939/papA5 | (cc=0.9442) | info on Rv2939/papA5 |
| Rv2928/tesA | (cc=0.6841) | info on Rv2928/tesA |
| Rv3274c/fadE25 | (cc=0.5489) | info on Rv3274c/fadE25 |
Correlation of Rv2935/ppsE with Rv2932/ppsB
Normalized LFCs for Rv2935/ppsE:
(description and provenance of datasets)
| Rv2935/ppsE | Rv2932/ppsB | |
| Fe_supp_jason_reseq | 1.16 | 1.59 |
| low_pH_jason_reseq | 2.523 | 2.362 |
| NO_jason_reseq | -0.625 | -0.609 |
| B6_jason_reseq | 2.04 | 1.74 |
| MHCII_jason_reseq | -2.889 | -2.896 |
| Isoniazid02 | -0.095 | -0.079 |
| Rifampicin4 | 0.953 | 0.977 |
| Ethambutol3 | 0.67 | 0.298 |
| Meropenem3 | 0.156 | 1.301 |
| Vancomycin16 | 0.096 | 0.446 |
| Rv2680_day32 | -1.809 | -1.872 |
| H37Rv_KO_MarP | -0.435 | 0.337 |
| hypoxia_3wks | 0.451 | 0.901 |
| hypoxia_6wks | -0.503 | -0.449 |
| glycerol | 3.976 | 3.274 |
| cholesterol | 2.724 | 2.06 |
| AJ | 0.61 | 0.745 |
| Bibs02 | -2.987 | -3.151 |
| Bibs02c | -3.519 | -3.087 |
| BL6 | 0.422 | 0.627 |
| BL6a | -0.9 | -0.839 |
| BXD01 | 1.388 | 1.825 |
| BXD010 | -0.12 | 0.236 |
| BXD011 | -0.745 | -0.053 |
| BXD03 | -0.282 | -0.215 |
| BXD04 | 0.537 | 1.392 |
| BXD05 | -1.467 | -1.087 |
| BXD06 | 0.04 | 0.29 |
| BXD07 | -0.056 | 0.158 |
| BXD08 | 1.12 | 1.37 |
| BXD09 | -0.494 | -0.202 |
| CAST | 2.471 | 2.613 |
| CCcont | 1.244 | 1.051 |
| DS01 | 0.489 | 0.325 |
| DS02 | 1.027 | 0.922 |
| DS04 | -0.098 | -0.499 |
| DS0c | -0.179 | -0.413 |
| GP01 | -2.328 | -2.119 |
| GP02 | -1.886 | -1.627 |
| GP0c | -3.195 | -2.791 |
| NOD | 1.97 | 1.91 |
| NZO | 2.195 | 2.604 |
| PWK | -0.121 | 0.176 |
| H37Rv_KO_CtpC | -0.814 | -0.755 |
| H37Rv_KO_CtpD | -0.537 | -0.304 |
| H37Rv_KO_Rv1272 | -1.217 | -1.181 |
| H37Rv_KO_SugABC | 1.304 | 1.092 |
| H37Rv_KO_MbtN | 0.644 | -0.479 |
| Trans05 | -0.371 | -0.982 |
| macrophage_unactivated | 3.961 | 3.857 |
| IL1 | -2.572 | -2.515 |
| Rapamycin | -2.167 | -2.047 |
| Tcell | 3.829 | 3.594 |
| GMCSF | -2.519 | -2.503 |
| IFNab | -1.911 | -2.016 |
| IFNg | -3.659 | -3.127 |
| IFNg_GMCSF1 | -1.159 | -1.141 |
| Rv1432_day32 | -0.15 | -0.454 |
| Rv1565c_day32 | -0.199 | -0.415 |
| secA2_input | -0.581 | -0.64 |
| delta_Rv3594 | -2.158 | -2.997 |
| delta_Rv3717 | -2.386 | -2.607 |
| delta_Rv3811 | -2.37 | -3.081 |
| delta_Rv0954 | -2.076 | -1.31 |
| PonA1 | -1.394 | -1.596 |
| EccD1_KO | -3.545 | -3.457 |
| EspI_KO | -3.074 | -2.447 |
| PE35_KO | 1.631 | 1.657 |
| PPE68_KO | 0.118 | -0.33 |
| glycerol2 | 0.74 | 0.971 |
| lignocerate | 0.588 | 0.615 |
| oleate | 0.732 | 1.16 |
| phosphatidylcholine | 0.867 | 1.076 |
| acetate | -0.289 | -0.008 |
| glucAc | -0.328 | -0.308 |
| Rv0950ko | -4.282 | -3.305 |
| Rv1096ko | -5.799 | -4.509 |
| Rv3684ko | -3.223 | -2.98 |
| delta_otsA_trehalose | 2.809 | 0.195 |