Top 10 genes with highest correlation to Rv2935/ppsE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2931/ppsA | (cc=0.9685) | info on Rv2931/ppsA |
| Rv2940c/mas | (cc=0.9663) | info on Rv2940c/mas |
| Rv2932/ppsB | (cc=0.9643) | info on Rv2932/ppsB |
| Rv2941/fadD28 | (cc=0.9605) | info on Rv2941/fadD28 |
| Rv2933/ppsC | (cc=0.9575) | info on Rv2933/ppsC |
| Rv2930/fadD26 | (cc=0.9545) | info on Rv2930/fadD26 |
| Rv2934/ppsD | (cc=0.9444) | info on Rv2934/ppsD |
| Rv2939/papA5 | (cc=0.9442) | info on Rv2939/papA5 |
| Rv2928/tesA | (cc=0.6841) | info on Rv2928/tesA |
| Rv3274c/fadE25 | (cc=0.5489) | info on Rv3274c/fadE25 |
Correlation of Rv2935/ppsE with Rv2931/ppsA
Normalized LFCs for Rv2935/ppsE:
(description and provenance of datasets)
| Rv2935/ppsE | Rv2931/ppsA | |
| Fe_supp_jason_reseq | 1.16 | 2.073 |
| low_pH_jason_reseq | 2.523 | 2.476 |
| NO_jason_reseq | -0.625 | -0.441 |
| B6_jason_reseq | 2.04 | 1.807 |
| MHCII_jason_reseq | -2.889 | -2.823 |
| Isoniazid02 | -0.095 | 0.295 |
| Rifampicin4 | 0.953 | 0.888 |
| Ethambutol3 | 0.67 | 0.116 |
| Meropenem3 | 0.156 | 0.49 |
| Vancomycin16 | 0.096 | -0.122 |
| Rv2680_day32 | -1.809 | -2.214 |
| H37Rv_KO_MarP | -0.435 | -0.559 |
| hypoxia_3wks | 0.451 | 0.985 |
| hypoxia_6wks | -0.503 | -0.171 |
| glycerol | 3.976 | 3.229 |
| cholesterol | 2.724 | 2.197 |
| AJ | 0.61 | 0.304 |
| Bibs02 | -2.987 | -3.444 |
| Bibs02c | -3.519 | -3.146 |
| BL6 | 0.422 | 0.604 |
| BL6a | -0.9 | -0.994 |
| BXD01 | 1.388 | 1.763 |
| BXD010 | -0.12 | 0.318 |
| BXD011 | -0.745 | -0.042 |
| BXD03 | -0.282 | -0.044 |
| BXD04 | 0.537 | 1.017 |
| BXD05 | -1.467 | -0.96 |
| BXD06 | 0.04 | 0.213 |
| BXD07 | -0.056 | 0.367 |
| BXD08 | 1.12 | 1.493 |
| BXD09 | -0.494 | -0.321 |
| CAST | 2.471 | 2.346 |
| CCcont | 1.244 | 1.122 |
| DS01 | 0.489 | 0.287 |
| DS02 | 1.027 | 0.833 |
| DS04 | -0.098 | 0.142 |
| DS0c | -0.179 | -0.553 |
| GP01 | -2.328 | -2.345 |
| GP02 | -1.886 | -1.976 |
| GP0c | -3.195 | -3.087 |
| NOD | 1.97 | 1.687 |
| NZO | 2.195 | 2.15 |
| PWK | -0.121 | -0.131 |
| H37Rv_KO_CtpC | -0.814 | -1.304 |
| H37Rv_KO_CtpD | -0.537 | -0.851 |
| H37Rv_KO_Rv1272 | -1.217 | -0.977 |
| H37Rv_KO_SugABC | 1.304 | 0.64 |
| H37Rv_KO_MbtN | 0.644 | -0.235 |
| Trans05 | -0.371 | -1.079 |
| macrophage_unactivated | 3.961 | 4.056 |
| IL1 | -2.572 | -2.462 |
| Rapamycin | -2.167 | -2.308 |
| Tcell | 3.829 | 4.005 |
| GMCSF | -2.519 | -2.886 |
| IFNab | -1.911 | -2.273 |
| IFNg | -3.659 | -3.782 |
| IFNg_GMCSF1 | -1.159 | -1.304 |
| Rv1432_day32 | -0.15 | 0.763 |
| Rv1565c_day32 | -0.199 | -0.199 |
| secA2_input | -0.581 | -0.639 |
| delta_Rv3594 | -2.158 | -2.489 |
| delta_Rv3717 | -2.386 | -2.245 |
| delta_Rv3811 | -2.37 | -2.211 |
| delta_Rv0954 | -2.076 | -1.053 |
| PonA1 | -1.394 | -1.29 |
| EccD1_KO | -3.545 | -3.595 |
| EspI_KO | -3.074 | -1.934 |
| PE35_KO | 1.631 | 1.96 |
| PPE68_KO | 0.118 | 0.141 |
| glycerol2 | 0.74 | 0.954 |
| lignocerate | 0.588 | 0.655 |
| oleate | 0.732 | 1.185 |
| phosphatidylcholine | 0.867 | 1.076 |
| acetate | -0.289 | -0.421 |
| glucAc | -0.328 | -0.462 |
| Rv0950ko | -4.282 | -3.757 |
| Rv1096ko | -5.799 | -5.398 |
| Rv3684ko | -3.223 | -3.449 |
| delta_otsA_trehalose | 2.809 | 0.356 |