Top 10 genes with highest correlation to Rv2931/ppsA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2933/ppsC | (cc=0.9817) | info on Rv2933/ppsC |
| Rv2932/ppsB | (cc=0.9806) | info on Rv2932/ppsB |
| Rv2940c/mas | (cc=0.9786) | info on Rv2940c/mas |
| Rv2941/fadD28 | (cc=0.9723) | info on Rv2941/fadD28 |
| Rv2930/fadD26 | (cc=0.9696) | info on Rv2930/fadD26 |
| Rv2935/ppsE | (cc=0.9685) | info on Rv2935/ppsE |
| Rv2939/papA5 | (cc=0.9626) | info on Rv2939/papA5 |
| Rv2934/ppsD | (cc=0.9459) | info on Rv2934/ppsD |
| Rv2928/tesA | (cc=0.7101) | info on Rv2928/tesA |
| Rv1472/echA12 | (cc=0.5537) | info on Rv1472/echA12 |
Correlation of Rv2931/ppsA with Rv2935/ppsE
Normalized LFCs for Rv2931/ppsA:
(description and provenance of datasets)
| Rv2931/ppsA | Rv2935/ppsE | |
| Fe_supp_jason_reseq | 2.073 | 1.16 |
| low_pH_jason_reseq | 2.476 | 2.523 |
| NO_jason_reseq | -0.441 | -0.625 |
| B6_jason_reseq | 1.807 | 2.04 |
| MHCII_jason_reseq | -2.823 | -2.889 |
| Isoniazid02 | 0.295 | -0.095 |
| Rifampicin4 | 0.888 | 0.953 |
| Ethambutol3 | 0.116 | 0.67 |
| Meropenem3 | 0.49 | 0.156 |
| Vancomycin16 | -0.122 | 0.096 |
| Rv2680_day32 | -2.214 | -1.809 |
| H37Rv_KO_MarP | -0.559 | -0.435 |
| hypoxia_3wks | 0.985 | 0.451 |
| hypoxia_6wks | -0.171 | -0.503 |
| glycerol | 3.229 | 3.976 |
| cholesterol | 2.197 | 2.724 |
| AJ | 0.304 | 0.61 |
| Bibs02 | -3.444 | -2.987 |
| Bibs02c | -3.146 | -3.519 |
| BL6 | 0.604 | 0.422 |
| BL6a | -0.994 | -0.9 |
| BXD01 | 1.763 | 1.388 |
| BXD010 | 0.318 | -0.12 |
| BXD011 | -0.042 | -0.745 |
| BXD03 | -0.044 | -0.282 |
| BXD04 | 1.017 | 0.537 |
| BXD05 | -0.96 | -1.467 |
| BXD06 | 0.213 | 0.04 |
| BXD07 | 0.367 | -0.056 |
| BXD08 | 1.493 | 1.12 |
| BXD09 | -0.321 | -0.494 |
| CAST | 2.346 | 2.471 |
| CCcont | 1.122 | 1.244 |
| DS01 | 0.287 | 0.489 |
| DS02 | 0.833 | 1.027 |
| DS04 | 0.142 | -0.098 |
| DS0c | -0.553 | -0.179 |
| GP01 | -2.345 | -2.328 |
| GP02 | -1.976 | -1.886 |
| GP0c | -3.087 | -3.195 |
| NOD | 1.687 | 1.97 |
| NZO | 2.15 | 2.195 |
| PWK | -0.131 | -0.121 |
| H37Rv_KO_CtpC | -1.304 | -0.814 |
| H37Rv_KO_CtpD | -0.851 | -0.537 |
| H37Rv_KO_Rv1272 | -0.977 | -1.217 |
| H37Rv_KO_SugABC | 0.64 | 1.304 |
| H37Rv_KO_MbtN | -0.235 | 0.644 |
| Trans05 | -1.079 | -0.371 |
| macrophage_unactivated | 4.056 | 3.961 |
| IL1 | -2.462 | -2.572 |
| Rapamycin | -2.308 | -2.167 |
| Tcell | 4.005 | 3.829 |
| GMCSF | -2.886 | -2.519 |
| IFNab | -2.273 | -1.911 |
| IFNg | -3.782 | -3.659 |
| IFNg_GMCSF1 | -1.304 | -1.159 |
| Rv1432_day32 | 0.763 | -0.15 |
| Rv1565c_day32 | -0.199 | -0.199 |
| secA2_input | -0.639 | -0.581 |
| delta_Rv3594 | -2.489 | -2.158 |
| delta_Rv3717 | -2.245 | -2.386 |
| delta_Rv3811 | -2.211 | -2.37 |
| delta_Rv0954 | -1.053 | -2.076 |
| PonA1 | -1.29 | -1.394 |
| EccD1_KO | -3.595 | -3.545 |
| EspI_KO | -1.934 | -3.074 |
| PE35_KO | 1.96 | 1.631 |
| PPE68_KO | 0.141 | 0.118 |
| glycerol2 | 0.954 | 0.74 |
| lignocerate | 0.655 | 0.588 |
| oleate | 1.185 | 0.732 |
| phosphatidylcholine | 1.076 | 0.867 |
| acetate | -0.421 | -0.289 |
| glucAc | -0.462 | -0.328 |
| Rv0950ko | -3.757 | -4.282 |
| Rv1096ko | -5.398 | -5.799 |
| Rv3684ko | -3.449 | -3.223 |
| delta_otsA_trehalose | 0.356 | 2.809 |