Top 10 genes with highest correlation to Rv2587c/secD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2583c/relA | (cc=0.5972) | info on Rv2583c/relA |
| Rv2060/- | (cc=0.561) | info on Rv2060/- |
| Rv3540c/ltp2 | (cc=0.5498) | info on Rv3540c/ltp2 |
| Rv3224A/- | (cc=0.5371) | info on Rv3224A/- |
| Rv3550/echA20 | (cc=0.5301) | info on Rv3550/echA20 |
| Rv2019/- | (cc=0.5253) | info on Rv2019/- |
| Rv1027c/kdpE | (cc=0.5239) | info on Rv1027c/kdpE |
| Rv1590/- | (cc=0.5139) | info on Rv1590/- |
| Rv1852/ureG | (cc=0.5131) | info on Rv1852/ureG |
| Rv3874/esxB | (cc=0.5123) | info on Rv3874/esxB |
Correlation of Rv2587c/secD with Rv3874/esxB
Normalized LFCs for Rv2587c/secD:
(description and provenance of datasets)
| Rv2587c/secD | Rv3874/esxB | |
| Fe_supp_jason_reseq | 1.029 | 2.171 |
| low_pH_jason_reseq | -1.158 | 0.895 |
| NO_jason_reseq | 1.089 | 2.221 |
| B6_jason_reseq | -1.035 | -1.502 |
| MHCII_jason_reseq | -1.046 | -0.667 |
| Isoniazid02 | 1.924 | -0.348 |
| Rifampicin4 | -0.252 | -0.847 |
| Ethambutol3 | 0.302 | -0.075 |
| Meropenem3 | -1.695 | 0.043 |
| Vancomycin16 | -0.796 | -0.634 |
| Rv2680_day32 | 0.0 | -1.662 |
| H37Rv_KO_MarP | -0.825 | -0.052 |
| hypoxia_3wks | -0.459 | 1.073 |
| hypoxia_6wks | -0.24 | 1.09 |
| glycerol | -0.607 | 0.162 |
| cholesterol | -0.435 | 0.033 |
| AJ | -0.698 | -4.809 |
| Bibs02 | -0.898 | -5.016 |
| Bibs02c | -0.82 | -3.265 |
| BL6 | 0.225 | -2.901 |
| BL6a | -0.595 | -3.801 |
| BXD01 | -0.182 | -2.221 |
| BXD010 | -0.629 | -3.513 |
| BXD011 | -0.383 | -2.712 |
| BXD03 | -0.664 | -3.452 |
| BXD04 | -0.607 | -2.497 |
| BXD05 | -0.527 | -2.1 |
| BXD06 | -0.29 | -3.096 |
| BXD07 | -0.543 | -3.535 |
| BXD08 | -0.521 | -3.649 |
| BXD09 | -0.196 | -3.587 |
| CAST | -0.903 | -5.342 |
| CCcont | 0.567 | -0.34 |
| DS01 | -1.16 | -3.119 |
| DS02 | -1.068 | -1.747 |
| DS04 | -0.953 | -3.384 |
| DS0c | -1.065 | -4.885 |
| GP01 | -0.387 | -2.438 |
| GP02 | -0.409 | -2.283 |
| GP0c | 0.082 | -1.553 |
| NOD | -0.88 | -4.107 |
| NZO | -0.98 | -5.092 |
| PWK | -0.769 | -4.691 |
| H37Rv_KO_CtpC | -0.637 | -1.903 |
| H37Rv_KO_CtpD | -0.085 | 0.458 |
| H37Rv_KO_Rv1272 | 1.557 | -1.826 |
| H37Rv_KO_SugABC | -0.487 | -0.313 |
| H37Rv_KO_MbtN | -0.404 | -1.541 |
| Trans05 | -0.393 | -1.797 |
| macrophage_unactivated | 0.947 | -2.456 |
| IL1 | 0.611 | -2.308 |
| Rapamycin | -0.353 | 0.353 |
| Tcell | 0.349 | -2.792 |
| GMCSF | -1.001 | -1.486 |
| IFNab | 0.0 | 0.133 |
| IFNg | 0.286 | -1.446 |
| IFNg_GMCSF1 | -0.361 | -2.13 |
| Rv1432_day32 | 0.0 | -2.542 |
| Rv1565c_day32 | -0.218 | -2.402 |
| secA2_input | -1.868 | 0.407 |
| delta_Rv3594 | 1.155 | -0.84 |
| delta_Rv3717 | 0.578 | -0.651 |
| delta_Rv3811 | 0.0 | -0.816 |
| delta_Rv0954 | 0.0 | -0.499 |
| PonA1 | -0.223 | -2.116 |
| EccD1_KO | 1.289 | -0.533 |
| EspI_KO | 0.248 | -2.564 |
| PE35_KO | 0.254 | -1.861 |
| PPE68_KO | 0.278 | -1.939 |
| glycerol2 | 0.82 | 1.304 |
| lignocerate | 1.386 | 2.087 |
| oleate | 0.0 | -1.418 |
| phosphatidylcholine | 1.297 | 1.611 |
| acetate | 2.292 | 2.635 |
| glucAc | 2.14 | 2.324 |
| Rv0950ko | 0.793 | 0.398 |
| Rv1096ko | 1.252 | 0.736 |
| Rv3684ko | 0.593 | 0.291 |
| delta_otsA_trehalose | 0.965 | -0.079 |