Top 10 genes with highest correlation to Rv2587c/secD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2583c/relA | (cc=0.5972) | info on Rv2583c/relA |
| Rv2060/- | (cc=0.561) | info on Rv2060/- |
| Rv3540c/ltp2 | (cc=0.5498) | info on Rv3540c/ltp2 |
| Rv3224A/- | (cc=0.5371) | info on Rv3224A/- |
| Rv3550/echA20 | (cc=0.5301) | info on Rv3550/echA20 |
| Rv2019/- | (cc=0.5253) | info on Rv2019/- |
| Rv1027c/kdpE | (cc=0.5239) | info on Rv1027c/kdpE |
| Rv1590/- | (cc=0.5139) | info on Rv1590/- |
| Rv1852/ureG | (cc=0.5131) | info on Rv1852/ureG |
| Rv3874/esxB | (cc=0.5123) | info on Rv3874/esxB |
Correlation of Rv2587c/secD with Rv2583c/relA
Normalized LFCs for Rv2587c/secD:
(description and provenance of datasets)
| Rv2587c/secD | Rv2583c/relA | |
| Fe_supp_jason_reseq | 1.029 | -0.268 |
| low_pH_jason_reseq | -1.158 | -2.113 |
| NO_jason_reseq | 1.089 | -0.108 |
| B6_jason_reseq | -1.035 | -1.759 |
| MHCII_jason_reseq | -1.046 | -0.901 |
| Isoniazid02 | 1.924 | 6.0 |
| Rifampicin4 | -0.252 | 1.822 |
| Ethambutol3 | 0.302 | 1.732 |
| Meropenem3 | -1.695 | 0.284 |
| Vancomycin16 | -0.796 | -2.122 |
| Rv2680_day32 | 0.0 | -0.816 |
| H37Rv_KO_MarP | -0.825 | -0.814 |
| hypoxia_3wks | -0.459 | -3.126 |
| hypoxia_6wks | -0.24 | -2.907 |
| glycerol | -0.607 | -3.553 |
| cholesterol | -0.435 | -3.023 |
| AJ | -0.698 | -3.504 |
| Bibs02 | -0.898 | -2.595 |
| Bibs02c | -0.82 | -4.611 |
| BL6 | 0.225 | -0.535 |
| BL6a | -0.595 | -3.566 |
| BXD01 | -0.182 | -1.705 |
| BXD010 | -0.629 | -2.903 |
| BXD011 | -0.383 | -2.658 |
| BXD03 | -0.664 | -3.156 |
| BXD04 | -0.607 | -2.976 |
| BXD05 | -0.527 | -2.368 |
| BXD06 | -0.29 | -3.212 |
| BXD07 | -0.543 | -1.52 |
| BXD08 | -0.521 | -3.201 |
| BXD09 | -0.196 | -2.312 |
| CAST | -0.903 | -4.807 |
| CCcont | 0.567 | -0.405 |
| DS01 | -1.16 | -5.205 |
| DS02 | -1.068 | -4.539 |
| DS04 | -0.953 | -4.819 |
| DS0c | -1.065 | -4.917 |
| GP01 | -0.387 | -2.625 |
| GP02 | -0.409 | -1.4 |
| GP0c | 0.082 | -2.515 |
| NOD | -0.88 | -4.815 |
| NZO | -0.98 | -3.676 |
| PWK | -0.769 | -4.322 |
| H37Rv_KO_CtpC | -0.637 | -3.067 |
| H37Rv_KO_CtpD | -0.085 | -1.532 |
| H37Rv_KO_Rv1272 | 1.557 | -3.023 |
| H37Rv_KO_SugABC | -0.487 | -1.743 |
| H37Rv_KO_MbtN | -0.404 | 0.679 |
| Trans05 | -0.393 | -2.879 |
| macrophage_unactivated | 0.947 | -0.253 |
| IL1 | 0.611 | -0.756 |
| Rapamycin | -0.353 | -2.105 |
| Tcell | 0.349 | -1.31 |
| GMCSF | -1.001 | -0.673 |
| IFNab | 0.0 | -0.632 |
| IFNg | 0.286 | -0.81 |
| IFNg_GMCSF1 | -0.361 | -2.357 |
| Rv1432_day32 | 0.0 | -2.381 |
| Rv1565c_day32 | -0.218 | -1.899 |
| secA2_input | -1.868 | -0.629 |
| delta_Rv3594 | 1.155 | 1.337 |
| delta_Rv3717 | 0.578 | 1.472 |
| delta_Rv3811 | 0.0 | 1.616 |
| delta_Rv0954 | 0.0 | 0.076 |
| PonA1 | -0.223 | -0.839 |
| EccD1_KO | 1.289 | -2.664 |
| EspI_KO | 0.248 | -3.719 |
| PE35_KO | 0.254 | -2.185 |
| PPE68_KO | 0.278 | -0.525 |
| glycerol2 | 0.82 | 4.726 |
| lignocerate | 1.386 | 1.218 |
| oleate | 0.0 | -0.196 |
| phosphatidylcholine | 1.297 | 3.018 |
| acetate | 2.292 | 1.18 |
| glucAc | 2.14 | 1.034 |
| Rv0950ko | 0.793 | -1.851 |
| Rv1096ko | 1.252 | -0.971 |
| Rv3684ko | 0.593 | 0.305 |
| delta_otsA_trehalose | 0.965 | 2.272 |