Top 10 genes with highest correlation to Rv2335/cysE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2334/cysK1 | (cc=0.8197) | info on Rv2334/cysK1 |
| Rv3855/ethR | (cc=0.6071) | info on Rv3855/ethR |
| Rv2581c/- | (cc=0.5998) | info on Rv2581c/- |
| Rv2782c/pepR | (cc=0.5932) | info on Rv2782c/pepR |
| Rv2398c/cysW | (cc=0.5585) | info on Rv2398c/cysW |
| Rv1239c/corA | (cc=0.5468) | info on Rv1239c/corA |
| Rv1072/- | (cc=0.5344) | info on Rv1072/- |
| Rv0805/- | (cc=0.5205) | info on Rv0805/- |
| Rv2795c/- | (cc=0.5076) | info on Rv2795c/- |
| Rv0554/bpoC | (cc=0.5047) | info on Rv0554/bpoC |
Correlation of Rv2335/cysE with Rv3855/ethR
Normalized LFCs for Rv2335/cysE:
(description and provenance of datasets)
| Rv2335/cysE | Rv3855/ethR | |
| Fe_supp_jason_reseq | 3.268 | 1.219 |
| low_pH_jason_reseq | 3.885 | 2.111 |
| NO_jason_reseq | -1.935 | -6.0 |
| B6_jason_reseq | 1.467 | 0.077 |
| MHCII_jason_reseq | -0.842 | -0.624 |
| Isoniazid02 | 2.714 | -0.982 |
| Rifampicin4 | 0.523 | -0.13 |
| Ethambutol3 | 1.018 | 0.316 |
| Meropenem3 | 0.0 | -0.058 |
| Vancomycin16 | 1.73 | 0.324 |
| Rv2680_day32 | 0.0 | -0.235 |
| H37Rv_KO_MarP | 1.274 | 0.937 |
| hypoxia_3wks | -1.36 | -1.065 |
| hypoxia_6wks | -0.518 | -1.539 |
| glycerol | 0.0 | 1.147 |
| cholesterol | 2.618 | 0.823 |
| AJ | 1.324 | -0.904 |
| Bibs02 | -0.183 | -0.759 |
| Bibs02c | -0.209 | 0.27 |
| BL6 | 1.125 | 0.852 |
| BL6a | 1.527 | 0.917 |
| BXD01 | 2.557 | 0.56 |
| BXD010 | 1.915 | -0.669 |
| BXD011 | 1.615 | -0.044 |
| BXD03 | 1.675 | 1.047 |
| BXD04 | 2.008 | 0.586 |
| BXD05 | 1.154 | -0.491 |
| BXD06 | 2.457 | -0.554 |
| BXD07 | 1.675 | 0.114 |
| BXD08 | 1.394 | -0.17 |
| BXD09 | 1.146 | -0.049 |
| CAST | 4.201 | 0.622 |
| CCcont | 1.565 | 0.962 |
| DS01 | 0.216 | -0.168 |
| DS02 | 0.704 | -0.692 |
| DS04 | 0.0 | 0.19 |
| DS0c | -0.217 | 0.614 |
| GP01 | -0.099 | 0.58 |
| GP02 | -0.083 | -0.122 |
| GP0c | -0.13 | -0.413 |
| NOD | 1.282 | 0.076 |
| NZO | 1.537 | -0.777 |
| PWK | 2.646 | -0.25 |
| H37Rv_KO_CtpC | 0.148 | -0.717 |
| H37Rv_KO_CtpD | 0.723 | 1.605 |
| H37Rv_KO_Rv1272 | 1.574 | -1.375 |
| H37Rv_KO_SugABC | -0.099 | -0.292 |
| H37Rv_KO_MbtN | 0.404 | -0.598 |
| Trans05 | 0.947 | 0.087 |
| macrophage_unactivated | -1.196 | -0.713 |
| IL1 | -1.124 | -0.872 |
| Rapamycin | 0.328 | -1.513 |
| Tcell | -0.785 | -0.254 |
| GMCSF | -1.001 | -1.03 |
| IFNab | -0.348 | -0.683 |
| IFNg | -1.013 | -0.724 |
| IFNg_GMCSF1 | -0.361 | -0.924 |
| Rv1432_day32 | 0.611 | -2.109 |
| Rv1565c_day32 | 2.631 | 0.359 |
| secA2_input | -1.296 | -0.351 |
| delta_Rv3594 | -2.348 | -0.852 |
| delta_Rv3717 | -3.335 | -1.787 |
| delta_Rv3811 | -3.324 | -1.924 |
| delta_Rv0954 | -0.667 | -0.093 |
| PonA1 | 0.537 | 0.016 |
| EccD1_KO | 1.694 | 0.385 |
| EspI_KO | 0.419 | -0.482 |
| PE35_KO | 2.269 | -0.111 |
| PPE68_KO | 2.188 | -0.608 |
| glycerol2 | -1.822 | -4.603 |
| lignocerate | -1.877 | -4.506 |
| oleate | -2.185 | -2.48 |
| phosphatidylcholine | -2.35 | -5.472 |
| acetate | 0.708 | -0.206 |
| glucAc | -0.199 | -0.711 |
| Rv0950ko | 1.143 | 0.235 |
| Rv1096ko | 1.541 | -0.06 |
| Rv3684ko | 2.577 | -0.033 |
| delta_otsA_trehalose | 0.468 | 1.297 |