Top 10 genes with highest correlation to Rv2335/cysE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2334/cysK1 | (cc=0.8197) | info on Rv2334/cysK1 |
| Rv3855/ethR | (cc=0.6071) | info on Rv3855/ethR |
| Rv2581c/- | (cc=0.5998) | info on Rv2581c/- |
| Rv2782c/pepR | (cc=0.5932) | info on Rv2782c/pepR |
| Rv2398c/cysW | (cc=0.5585) | info on Rv2398c/cysW |
| Rv1239c/corA | (cc=0.5468) | info on Rv1239c/corA |
| Rv1072/- | (cc=0.5344) | info on Rv1072/- |
| Rv0805/- | (cc=0.5205) | info on Rv0805/- |
| Rv2795c/- | (cc=0.5076) | info on Rv2795c/- |
| Rv0554/bpoC | (cc=0.5047) | info on Rv0554/bpoC |
Correlation of Rv2335/cysE with Rv2782c/pepR
Normalized LFCs for Rv2335/cysE:
(description and provenance of datasets)
| Rv2335/cysE | Rv2782c/pepR | |
| Fe_supp_jason_reseq | 3.268 | 1.5 |
| low_pH_jason_reseq | 3.885 | 0.39 |
| NO_jason_reseq | -1.935 | -0.549 |
| B6_jason_reseq | 1.467 | 0.514 |
| MHCII_jason_reseq | -0.842 | 0.337 |
| Isoniazid02 | 2.714 | 0.348 |
| Rifampicin4 | 0.523 | 1.584 |
| Ethambutol3 | 1.018 | -0.035 |
| Meropenem3 | 0.0 | 2.27 |
| Vancomycin16 | 1.73 | 0.883 |
| Rv2680_day32 | 0.0 | 0.997 |
| H37Rv_KO_MarP | 1.274 | -1.089 |
| hypoxia_3wks | -1.36 | -2.408 |
| hypoxia_6wks | -0.518 | -1.693 |
| glycerol | 0.0 | -0.546 |
| cholesterol | 2.618 | -0.972 |
| AJ | 1.324 | -0.442 |
| Bibs02 | -0.183 | -0.629 |
| Bibs02c | -0.209 | 0.671 |
| BL6 | 1.125 | 0.865 |
| BL6a | 1.527 | 0.304 |
| BXD01 | 2.557 | 0.364 |
| BXD010 | 1.915 | 0.454 |
| BXD011 | 1.615 | -0.161 |
| BXD03 | 1.675 | 0.722 |
| BXD04 | 2.008 | -0.07 |
| BXD05 | 1.154 | 0.503 |
| BXD06 | 2.457 | 0.316 |
| BXD07 | 1.675 | 0.49 |
| BXD08 | 1.394 | 0.128 |
| BXD09 | 1.146 | 0.248 |
| CAST | 4.201 | 0.062 |
| CCcont | 1.565 | 0.428 |
| DS01 | 0.216 | 0.147 |
| DS02 | 0.704 | 0.854 |
| DS04 | 0.0 | -0.594 |
| DS0c | -0.217 | -1.455 |
| GP01 | -0.099 | -1.525 |
| GP02 | -0.083 | -0.544 |
| GP0c | -0.13 | -1.493 |
| NOD | 1.282 | -0.332 |
| NZO | 1.537 | 0.053 |
| PWK | 2.646 | 0.205 |
| H37Rv_KO_CtpC | 0.148 | -0.172 |
| H37Rv_KO_CtpD | 0.723 | 0.648 |
| H37Rv_KO_Rv1272 | 1.574 | -0.805 |
| H37Rv_KO_SugABC | -0.099 | -0.505 |
| H37Rv_KO_MbtN | 0.404 | -1.475 |
| Trans05 | 0.947 | -0.81 |
| macrophage_unactivated | -1.196 | -0.966 |
| IL1 | -1.124 | 0.128 |
| Rapamycin | 0.328 | -0.39 |
| Tcell | -0.785 | 0.072 |
| GMCSF | -1.001 | -1.146 |
| IFNab | -0.348 | -2.373 |
| IFNg | -1.013 | -1.622 |
| IFNg_GMCSF1 | -0.361 | -1.804 |
| Rv1432_day32 | 0.611 | -0.15 |
| Rv1565c_day32 | 2.631 | -0.425 |
| secA2_input | -1.296 | -1.34 |
| delta_Rv3594 | -2.348 | -1.869 |
| delta_Rv3717 | -3.335 | -3.01 |
| delta_Rv3811 | -3.324 | -2.162 |
| delta_Rv0954 | -0.667 | -0.376 |
| PonA1 | 0.537 | 0.279 |
| EccD1_KO | 1.694 | 0.056 |
| EspI_KO | 0.419 | -0.87 |
| PE35_KO | 2.269 | 1.135 |
| PPE68_KO | 2.188 | 0.368 |
| glycerol2 | -1.822 | -0.566 |
| lignocerate | -1.877 | -1.579 |
| oleate | -2.185 | -3.088 |
| phosphatidylcholine | -2.35 | -0.695 |
| acetate | 0.708 | 0.081 |
| glucAc | -0.199 | 0.18 |
| Rv0950ko | 1.143 | -0.757 |
| Rv1096ko | 1.541 | -0.437 |
| Rv3684ko | 2.577 | 0.478 |
| delta_otsA_trehalose | 0.468 | 0.179 |