Top 10 genes with highest correlation to Rv2335/cysE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2334/cysK1 | (cc=0.8197) | info on Rv2334/cysK1 |
| Rv3855/ethR | (cc=0.6071) | info on Rv3855/ethR |
| Rv2581c/- | (cc=0.5998) | info on Rv2581c/- |
| Rv2782c/pepR | (cc=0.5932) | info on Rv2782c/pepR |
| Rv2398c/cysW | (cc=0.5585) | info on Rv2398c/cysW |
| Rv1239c/corA | (cc=0.5468) | info on Rv1239c/corA |
| Rv1072/- | (cc=0.5344) | info on Rv1072/- |
| Rv0805/- | (cc=0.5205) | info on Rv0805/- |
| Rv2795c/- | (cc=0.5076) | info on Rv2795c/- |
| Rv0554/bpoC | (cc=0.5047) | info on Rv0554/bpoC |
Correlation of Rv2335/cysE with Rv2398c/cysW
Normalized LFCs for Rv2335/cysE:
(description and provenance of datasets)
| Rv2335/cysE | Rv2398c/cysW | |
| Fe_supp_jason_reseq | 3.268 | -0.559 |
| low_pH_jason_reseq | 3.885 | 2.469 |
| NO_jason_reseq | -1.935 | -0.929 |
| B6_jason_reseq | 1.467 | 1.243 |
| MHCII_jason_reseq | -0.842 | -1.175 |
| Isoniazid02 | 2.714 | -0.627 |
| Rifampicin4 | 0.523 | -0.26 |
| Ethambutol3 | 1.018 | 0.263 |
| Meropenem3 | 0.0 | -0.593 |
| Vancomycin16 | 1.73 | 0.239 |
| Rv2680_day32 | 0.0 | 0.0 |
| H37Rv_KO_MarP | 1.274 | -1.317 |
| hypoxia_3wks | -1.36 | -0.371 |
| hypoxia_6wks | -0.518 | 1.462 |
| glycerol | 0.0 | 0.709 |
| cholesterol | 2.618 | 0.0 |
| AJ | 1.324 | 0.637 |
| Bibs02 | -0.183 | 0.0 |
| Bibs02c | -0.209 | 0.0 |
| BL6 | 1.125 | 0.125 |
| BL6a | 1.527 | 0.696 |
| BXD01 | 2.557 | 2.505 |
| BXD010 | 1.915 | 0.543 |
| BXD011 | 1.615 | 0.243 |
| BXD03 | 1.675 | 1.687 |
| BXD04 | 2.008 | 2.08 |
| BXD05 | 1.154 | 1.109 |
| BXD06 | 2.457 | 1.898 |
| BXD07 | 1.675 | 1.003 |
| BXD08 | 1.394 | 3.201 |
| BXD09 | 1.146 | 0.943 |
| CAST | 4.201 | 2.563 |
| CCcont | 1.565 | 0.829 |
| DS01 | 0.216 | 0.0 |
| DS02 | 0.704 | 0.0 |
| DS04 | 0.0 | 0.0 |
| DS0c | -0.217 | 0.596 |
| GP01 | -0.099 | 0.0 |
| GP02 | -0.083 | 0.0 |
| GP0c | -0.13 | 0.248 |
| NOD | 1.282 | 1.507 |
| NZO | 1.537 | 0.199 |
| PWK | 2.646 | 0.196 |
| H37Rv_KO_CtpC | 0.148 | 0.309 |
| H37Rv_KO_CtpD | 0.723 | 0.241 |
| H37Rv_KO_Rv1272 | 1.574 | 0.0 |
| H37Rv_KO_SugABC | -0.099 | 0.099 |
| H37Rv_KO_MbtN | 0.404 | 0.633 |
| Trans05 | 0.947 | 3.198 |
| macrophage_unactivated | -1.196 | -0.761 |
| IL1 | -1.124 | -1.124 |
| Rapamycin | 0.328 | -0.74 |
| Tcell | -0.785 | -0.785 |
| GMCSF | -1.001 | -1.001 |
| IFNab | -0.348 | 0.623 |
| IFNg | -1.013 | -1.013 |
| IFNg_GMCSF1 | -0.361 | -0.757 |
| Rv1432_day32 | 0.611 | 0.0 |
| Rv1565c_day32 | 2.631 | 0.0 |
| secA2_input | -1.296 | -2.027 |
| delta_Rv3594 | -2.348 | -1.689 |
| delta_Rv3717 | -3.335 | -2.648 |
| delta_Rv3811 | -3.324 | -4.054 |
| delta_Rv0954 | -0.667 | -1.902 |
| PonA1 | 0.537 | -2.428 |
| EccD1_KO | 1.694 | -3.147 |
| EspI_KO | 0.419 | -3.246 |
| PE35_KO | 2.269 | 2.374 |
| PPE68_KO | 2.188 | 0.653 |
| glycerol2 | -1.822 | -2.028 |
| lignocerate | -1.877 | -1.469 |
| oleate | -2.185 | -1.874 |
| phosphatidylcholine | -2.35 | -1.689 |
| acetate | 0.708 | -0.637 |
| glucAc | -0.199 | -1.034 |
| Rv0950ko | 1.143 | -2.527 |
| Rv1096ko | 1.541 | -1.915 |
| Rv3684ko | 2.577 | -1.955 |
| delta_otsA_trehalose | 0.468 | 1.3 |