Top 10 genes with highest correlation to Rv2335/cysE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2334/cysK1 | (cc=0.8197) | info on Rv2334/cysK1 |
| Rv3855/ethR | (cc=0.6071) | info on Rv3855/ethR |
| Rv2581c/- | (cc=0.5998) | info on Rv2581c/- |
| Rv2782c/pepR | (cc=0.5932) | info on Rv2782c/pepR |
| Rv2398c/cysW | (cc=0.5585) | info on Rv2398c/cysW |
| Rv1239c/corA | (cc=0.5468) | info on Rv1239c/corA |
| Rv1072/- | (cc=0.5344) | info on Rv1072/- |
| Rv0805/- | (cc=0.5205) | info on Rv0805/- |
| Rv2795c/- | (cc=0.5076) | info on Rv2795c/- |
| Rv0554/bpoC | (cc=0.5047) | info on Rv0554/bpoC |
Correlation of Rv2335/cysE with Rv1072/-
Normalized LFCs for Rv2335/cysE:
(description and provenance of datasets)
| Rv2335/cysE | Rv1072/- | |
| Fe_supp_jason_reseq | 3.268 | 3.452 |
| low_pH_jason_reseq | 3.885 | 0.709 |
| NO_jason_reseq | -1.935 | -0.205 |
| B6_jason_reseq | 1.467 | 1.58 |
| MHCII_jason_reseq | -0.842 | 0.0 |
| Isoniazid02 | 2.714 | -2.007 |
| Rifampicin4 | 0.523 | -0.653 |
| Ethambutol3 | 1.018 | 3.263 |
| Meropenem3 | 0.0 | 0.586 |
| Vancomycin16 | 1.73 | -0.727 |
| Rv2680_day32 | 0.0 | -0.803 |
| H37Rv_KO_MarP | 1.274 | -2.718 |
| hypoxia_3wks | -1.36 | 0.0 |
| hypoxia_6wks | -0.518 | 1.451 |
| glycerol | 0.0 | 0.089 |
| cholesterol | 2.618 | -1.261 |
| AJ | 1.324 | 0.948 |
| Bibs02 | -0.183 | 0.747 |
| Bibs02c | -0.209 | 0.653 |
| BL6 | 1.125 | 2.081 |
| BL6a | 1.527 | 1.728 |
| BXD01 | 2.557 | 3.146 |
| BXD010 | 1.915 | 2.277 |
| BXD011 | 1.615 | 3.036 |
| BXD03 | 1.675 | 2.899 |
| BXD04 | 2.008 | 5.696 |
| BXD05 | 1.154 | 2.5 |
| BXD06 | 2.457 | 2.909 |
| BXD07 | 1.675 | 2.518 |
| BXD08 | 1.394 | 3.668 |
| BXD09 | 1.146 | 1.736 |
| CAST | 4.201 | 4.513 |
| CCcont | 1.565 | 2.429 |
| DS01 | 0.216 | 0.965 |
| DS02 | 0.704 | 0.821 |
| DS04 | 0.0 | 0.793 |
| DS0c | -0.217 | 0.748 |
| GP01 | -0.099 | 0.0 |
| GP02 | -0.083 | -0.166 |
| GP0c | -0.13 | -0.26 |
| NOD | 1.282 | 1.87 |
| NZO | 1.537 | 0.815 |
| PWK | 2.646 | 2.865 |
| H37Rv_KO_CtpC | 0.148 | 3.557 |
| H37Rv_KO_CtpD | 0.723 | 1.054 |
| H37Rv_KO_Rv1272 | 1.574 | 1.837 |
| H37Rv_KO_SugABC | -0.099 | 1.948 |
| H37Rv_KO_MbtN | 0.404 | 2.179 |
| Trans05 | 0.947 | 2.15 |
| macrophage_unactivated | -1.196 | -1.13 |
| IL1 | -1.124 | -1.949 |
| Rapamycin | 0.328 | -2.961 |
| Tcell | -0.785 | 1.466 |
| GMCSF | -1.001 | -1.191 |
| IFNab | -0.348 | 0.0 |
| IFNg | -1.013 | -1.756 |
| IFNg_GMCSF1 | -0.361 | -0.465 |
| Rv1432_day32 | 0.611 | -0.887 |
| Rv1565c_day32 | 2.631 | 0.401 |
| secA2_input | -1.296 | 1.079 |
| delta_Rv3594 | -2.348 | -0.846 |
| delta_Rv3717 | -3.335 | -2.079 |
| delta_Rv3811 | -3.324 | -0.717 |
| delta_Rv0954 | -0.667 | -2.135 |
| PonA1 | 0.537 | -1.272 |
| EccD1_KO | 1.694 | 1.312 |
| EspI_KO | 0.419 | 1.041 |
| PE35_KO | 2.269 | 0.306 |
| PPE68_KO | 2.188 | 0.653 |
| glycerol2 | -1.822 | -0.451 |
| lignocerate | -1.877 | -0.897 |
| oleate | -2.185 | -0.588 |
| phosphatidylcholine | -2.35 | -1.207 |
| acetate | 0.708 | -0.535 |
| glucAc | -0.199 | 0.554 |
| Rv0950ko | 1.143 | 0.28 |
| Rv1096ko | 1.541 | 2.524 |
| Rv3684ko | 2.577 | 2.6 |
| delta_otsA_trehalose | 0.468 | -1.013 |