Top 10 genes with highest correlation to Rv2335/cysE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2334/cysK1 | (cc=0.8197) | info on Rv2334/cysK1 |
| Rv3855/ethR | (cc=0.6071) | info on Rv3855/ethR |
| Rv2581c/- | (cc=0.5998) | info on Rv2581c/- |
| Rv2782c/pepR | (cc=0.5932) | info on Rv2782c/pepR |
| Rv2398c/cysW | (cc=0.5585) | info on Rv2398c/cysW |
| Rv1239c/corA | (cc=0.5468) | info on Rv1239c/corA |
| Rv1072/- | (cc=0.5344) | info on Rv1072/- |
| Rv0805/- | (cc=0.5205) | info on Rv0805/- |
| Rv2795c/- | (cc=0.5076) | info on Rv2795c/- |
| Rv0554/bpoC | (cc=0.5047) | info on Rv0554/bpoC |
Correlation of Rv2335/cysE with Rv1239c/corA
Normalized LFCs for Rv2335/cysE:
(description and provenance of datasets)
| Rv2335/cysE | Rv1239c/corA | |
| Fe_supp_jason_reseq | 3.268 | -0.69 |
| low_pH_jason_reseq | 3.885 | 1.064 |
| NO_jason_reseq | -1.935 | 1.433 |
| B6_jason_reseq | 1.467 | 0.087 |
| MHCII_jason_reseq | -0.842 | -1.266 |
| Isoniazid02 | 2.714 | 0.036 |
| Rifampicin4 | 0.523 | -0.625 |
| Ethambutol3 | 1.018 | 0.0 |
| Meropenem3 | 0.0 | -1.067 |
| Vancomycin16 | 1.73 | -0.459 |
| Rv2680_day32 | 0.0 | 0.318 |
| H37Rv_KO_MarP | 1.274 | 0.505 |
| hypoxia_3wks | -1.36 | -2.117 |
| hypoxia_6wks | -0.518 | 0.848 |
| glycerol | 0.0 | 0.984 |
| cholesterol | 2.618 | 0.04 |
| AJ | 1.324 | 1.869 |
| Bibs02 | -0.183 | -0.338 |
| Bibs02c | -0.209 | -0.69 |
| BL6 | 1.125 | 1.43 |
| BL6a | 1.527 | 2.099 |
| BXD01 | 2.557 | 2.917 |
| BXD010 | 1.915 | 2.38 |
| BXD011 | 1.615 | 3.779 |
| BXD03 | 1.675 | 2.051 |
| BXD04 | 2.008 | 3.404 |
| BXD05 | 1.154 | 2.764 |
| BXD06 | 2.457 | 3.273 |
| BXD07 | 1.675 | 2.452 |
| BXD08 | 1.394 | 3.451 |
| BXD09 | 1.146 | 2.319 |
| CAST | 4.201 | 3.712 |
| CCcont | 1.565 | 0.288 |
| DS01 | 0.216 | -0.732 |
| DS02 | 0.704 | -1.182 |
| DS04 | 0.0 | 0.132 |
| DS0c | -0.217 | -0.757 |
| GP01 | -0.099 | -0.288 |
| GP02 | -0.083 | 0.034 |
| GP0c | -0.13 | 0.251 |
| NOD | 1.282 | 1.23 |
| NZO | 1.537 | 2.164 |
| PWK | 2.646 | 4.489 |
| H37Rv_KO_CtpC | 0.148 | 0.494 |
| H37Rv_KO_CtpD | 0.723 | 1.213 |
| H37Rv_KO_Rv1272 | 1.574 | 1.06 |
| H37Rv_KO_SugABC | -0.099 | 1.269 |
| H37Rv_KO_MbtN | 0.404 | 0.732 |
| Trans05 | 0.947 | 1.737 |
| macrophage_unactivated | -1.196 | -2.257 |
| IL1 | -1.124 | -1.0 |
| Rapamycin | 0.328 | -2.427 |
| Tcell | -0.785 | 0.596 |
| GMCSF | -1.001 | -0.694 |
| IFNab | -0.348 | -2.013 |
| IFNg | -1.013 | -1.505 |
| IFNg_GMCSF1 | -0.361 | -2.017 |
| Rv1432_day32 | 0.611 | 0.731 |
| Rv1565c_day32 | 2.631 | -1.311 |
| secA2_input | -1.296 | -0.377 |
| delta_Rv3594 | -2.348 | -0.234 |
| delta_Rv3717 | -3.335 | 0.766 |
| delta_Rv3811 | -3.324 | -1.084 |
| delta_Rv0954 | -0.667 | -0.596 |
| PonA1 | 0.537 | 0.792 |
| EccD1_KO | 1.694 | -0.72 |
| EspI_KO | 0.419 | -0.941 |
| PE35_KO | 2.269 | -0.998 |
| PPE68_KO | 2.188 | -0.893 |
| glycerol2 | -1.822 | -1.449 |
| lignocerate | -1.877 | -2.954 |
| oleate | -2.185 | -2.884 |
| phosphatidylcholine | -2.35 | -2.578 |
| acetate | 0.708 | -0.785 |
| glucAc | -0.199 | -1.674 |
| Rv0950ko | 1.143 | 1.447 |
| Rv1096ko | 1.541 | 0.072 |
| Rv3684ko | 2.577 | 1.601 |
| delta_otsA_trehalose | 0.468 | 0.147 |