Top 10 genes with highest correlation to Rv2197c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1887/- | (cc=0.7622) | info on Rv1887/- |
| Rv3630/- | (cc=0.6441) | info on Rv3630/- |
| Rv0645c/mmaA1 | (cc=0.5872) | info on Rv0645c/mmaA1 |
| Rv0007/- | (cc=0.559) | info on Rv0007/- |
| Rv0466/- | (cc=0.545) | info on Rv0466/- |
| Rv1491c/- | (cc=0.5395) | info on Rv1491c/- |
| Rv0129c/fbpC | (cc=0.539) | info on Rv0129c/fbpC |
| Rv2190c/- | (cc=0.5346) | info on Rv2190c/- |
| Rv3205c/- | (cc=0.5333) | info on Rv3205c/- |
| Rv1747/- | (cc=0.5202) | info on Rv1747/- |
Correlation of Rv2197c/- with Rv3205c/-
Normalized LFCs for Rv2197c/-:
(description and provenance of datasets)
| Rv2197c/- | Rv3205c/- | |
| Fe_supp_jason_reseq | -0.458 | 0.398 |
| low_pH_jason_reseq | -0.192 | -1.35 |
| NO_jason_reseq | -1.641 | -2.625 |
| B6_jason_reseq | 0.678 | -0.895 |
| MHCII_jason_reseq | 0.414 | 0.637 |
| Isoniazid02 | 0.806 | -0.418 |
| Rifampicin4 | -3.041 | -1.801 |
| Ethambutol3 | -0.494 | -1.2 |
| Meropenem3 | -1.329 | -1.277 |
| Vancomycin16 | -4.067 | -3.13 |
| Rv2680_day32 | 1.061 | -0.548 |
| H37Rv_KO_MarP | -1.49 | -2.379 |
| hypoxia_3wks | 0.283 | 1.527 |
| hypoxia_6wks | 1.159 | 0.393 |
| glycerol | -0.79 | 0.671 |
| cholesterol | -0.371 | 0.15 |
| AJ | -0.771 | -1.222 |
| Bibs02 | -0.166 | -1.491 |
| Bibs02c | -1.129 | 0.336 |
| BL6 | 0.49 | -1.144 |
| BL6a | -0.042 | 0.244 |
| BXD01 | 0.158 | 0.643 |
| BXD010 | 0.675 | -0.086 |
| BXD011 | 1.053 | 0.157 |
| BXD03 | -0.412 | 0.428 |
| BXD04 | -0.477 | -0.409 |
| BXD05 | 0.07 | 0.665 |
| BXD06 | 0.354 | 0.138 |
| BXD07 | 0.523 | 0.274 |
| BXD08 | 0.591 | 0.62 |
| BXD09 | 0.534 | 0.303 |
| CAST | -1.103 | -0.322 |
| CCcont | 0.142 | -0.365 |
| DS01 | -1.391 | -0.643 |
| DS02 | 0.017 | 0.137 |
| DS04 | -1.185 | 0.419 |
| DS0c | 0.349 | 0.047 |
| GP01 | 1.47 | -0.633 |
| GP02 | 0.632 | 1.486 |
| GP0c | 0.571 | -0.639 |
| NOD | -1.811 | -1.183 |
| NZO | -0.841 | -1.445 |
| PWK | -2.663 | -1.179 |
| H37Rv_KO_CtpC | -0.911 | -0.187 |
| H37Rv_KO_CtpD | 0.384 | -0.208 |
| H37Rv_KO_Rv1272 | 0.106 | -1.219 |
| H37Rv_KO_SugABC | -0.126 | 1.086 |
| H37Rv_KO_MbtN | 0.676 | 1.418 |
| Trans05 | 0.666 | 1.339 |
| macrophage_unactivated | -0.862 | 0.537 |
| IL1 | 0.306 | 0.658 |
| Rapamycin | 0.034 | -0.285 |
| Tcell | -2.203 | 0.639 |
| GMCSF | -0.211 | -0.246 |
| IFNab | 0.665 | -0.481 |
| IFNg | 0.275 | 0.307 |
| IFNg_GMCSF1 | 0.104 | -0.292 |
| Rv1432_day32 | 1.624 | -0.263 |
| Rv1565c_day32 | 2.647 | 1.579 |
| secA2_input | -0.584 | -0.822 |
| delta_Rv3594 | 0.788 | 0.13 |
| delta_Rv3717 | 1.402 | 0.036 |
| delta_Rv3811 | 1.071 | -0.134 |
| delta_Rv0954 | 0.225 | 0.774 |
| PonA1 | -1.334 | -0.601 |
| EccD1_KO | -1.983 | -2.23 |
| EspI_KO | -0.234 | 0.117 |
| PE35_KO | -1.155 | 0.385 |
| PPE68_KO | -1.517 | -0.368 |
| glycerol2 | -0.764 | -0.104 |
| lignocerate | -0.451 | -1.253 |
| oleate | -0.146 | -0.7 |
| phosphatidylcholine | -1.242 | -0.104 |
| acetate | -0.015 | 0.023 |
| glucAc | -0.535 | -1.899 |
| Rv0950ko | -0.045 | -0.651 |
| Rv1096ko | -0.072 | -0.112 |
| Rv3684ko | 1.012 | 2.636 |
| delta_otsA_trehalose | -0.717 | 0.578 |