Top 10 genes with highest correlation to Rv2197c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1887/- | (cc=0.7622) | info on Rv1887/- |
| Rv3630/- | (cc=0.6441) | info on Rv3630/- |
| Rv0645c/mmaA1 | (cc=0.5872) | info on Rv0645c/mmaA1 |
| Rv0007/- | (cc=0.559) | info on Rv0007/- |
| Rv0466/- | (cc=0.545) | info on Rv0466/- |
| Rv1491c/- | (cc=0.5395) | info on Rv1491c/- |
| Rv0129c/fbpC | (cc=0.539) | info on Rv0129c/fbpC |
| Rv2190c/- | (cc=0.5346) | info on Rv2190c/- |
| Rv3205c/- | (cc=0.5333) | info on Rv3205c/- |
| Rv1747/- | (cc=0.5202) | info on Rv1747/- |
Correlation of Rv2197c/- with Rv0466/-
Normalized LFCs for Rv2197c/-:
(description and provenance of datasets)
| Rv2197c/- | Rv0466/- | |
| Fe_supp_jason_reseq | -0.458 | -0.219 |
| low_pH_jason_reseq | -0.192 | 0.171 |
| NO_jason_reseq | -1.641 | -4.762 |
| B6_jason_reseq | 0.678 | -0.107 |
| MHCII_jason_reseq | 0.414 | 0.798 |
| Isoniazid02 | 0.806 | -0.112 |
| Rifampicin4 | -3.041 | -0.265 |
| Ethambutol3 | -0.494 | -0.258 |
| Meropenem3 | -1.329 | 0.871 |
| Vancomycin16 | -4.067 | -0.674 |
| Rv2680_day32 | 1.061 | 1.01 |
| H37Rv_KO_MarP | -1.49 | -2.88 |
| hypoxia_3wks | 0.283 | 2.727 |
| hypoxia_6wks | 1.159 | 5.101 |
| glycerol | -0.79 | 0.051 |
| cholesterol | -0.371 | 0.604 |
| AJ | -0.771 | -1.136 |
| Bibs02 | -0.166 | -0.477 |
| Bibs02c | -1.129 | -1.611 |
| BL6 | 0.49 | 1.673 |
| BL6a | -0.042 | 1.435 |
| BXD01 | 0.158 | 2.579 |
| BXD010 | 0.675 | 0.785 |
| BXD011 | 1.053 | 1.976 |
| BXD03 | -0.412 | -0.648 |
| BXD04 | -0.477 | 1.332 |
| BXD05 | 0.07 | 0.8 |
| BXD06 | 0.354 | 1.769 |
| BXD07 | 0.523 | 2.508 |
| BXD08 | 0.591 | 1.861 |
| BXD09 | 0.534 | 2.511 |
| CAST | -1.103 | -1.25 |
| CCcont | 0.142 | 1.062 |
| DS01 | -1.391 | -2.868 |
| DS02 | 0.017 | -0.64 |
| DS04 | -1.185 | 0.086 |
| DS0c | 0.349 | 0.311 |
| GP01 | 1.47 | 1.001 |
| GP02 | 0.632 | -0.022 |
| GP0c | 0.571 | -0.197 |
| NOD | -1.811 | -0.643 |
| NZO | -0.841 | -1.536 |
| PWK | -2.663 | -4.014 |
| H37Rv_KO_CtpC | -0.911 | -0.451 |
| H37Rv_KO_CtpD | 0.384 | 0.643 |
| H37Rv_KO_Rv1272 | 0.106 | 0.287 |
| H37Rv_KO_SugABC | -0.126 | 1.656 |
| H37Rv_KO_MbtN | 0.676 | 1.439 |
| Trans05 | 0.666 | 1.18 |
| macrophage_unactivated | -0.862 | 0.379 |
| IL1 | 0.306 | -0.196 |
| Rapamycin | 0.034 | -0.638 |
| Tcell | -2.203 | 2.597 |
| GMCSF | -0.211 | -0.628 |
| IFNab | 0.665 | -0.396 |
| IFNg | 0.275 | -1.451 |
| IFNg_GMCSF1 | 0.104 | -0.83 |
| Rv1432_day32 | 1.624 | 4.056 |
| Rv1565c_day32 | 2.647 | 2.088 |
| secA2_input | -0.584 | 1.043 |
| delta_Rv3594 | 0.788 | 1.023 |
| delta_Rv3717 | 1.402 | 2.863 |
| delta_Rv3811 | 1.071 | 1.254 |
| delta_Rv0954 | 0.225 | -0.421 |
| PonA1 | -1.334 | -1.885 |
| EccD1_KO | -1.983 | -0.49 |
| EspI_KO | -0.234 | 0.091 |
| PE35_KO | -1.155 | -0.12 |
| PPE68_KO | -1.517 | -0.186 |
| glycerol2 | -0.764 | 0.563 |
| lignocerate | -0.451 | -0.806 |
| oleate | -0.146 | -2.802 |
| phosphatidylcholine | -1.242 | -0.021 |
| acetate | -0.015 | -0.567 |
| glucAc | -0.535 | -0.437 |
| Rv0950ko | -0.045 | 0.157 |
| Rv1096ko | -0.072 | -1.698 |
| Rv3684ko | 1.012 | 1.205 |
| delta_otsA_trehalose | -0.717 | 0.17 |