Top 10 genes with highest correlation to Rv2197c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1887/- | (cc=0.7622) | info on Rv1887/- |
| Rv3630/- | (cc=0.6441) | info on Rv3630/- |
| Rv0645c/mmaA1 | (cc=0.5872) | info on Rv0645c/mmaA1 |
| Rv0007/- | (cc=0.559) | info on Rv0007/- |
| Rv0466/- | (cc=0.545) | info on Rv0466/- |
| Rv1491c/- | (cc=0.5395) | info on Rv1491c/- |
| Rv0129c/fbpC | (cc=0.539) | info on Rv0129c/fbpC |
| Rv2190c/- | (cc=0.5346) | info on Rv2190c/- |
| Rv3205c/- | (cc=0.5333) | info on Rv3205c/- |
| Rv1747/- | (cc=0.5202) | info on Rv1747/- |
Correlation of Rv2197c/- with Rv2190c/-
Normalized LFCs for Rv2197c/-:
(description and provenance of datasets)
| Rv2197c/- | Rv2190c/- | |
| Fe_supp_jason_reseq | -0.458 | 2.516 |
| low_pH_jason_reseq | -0.192 | -0.221 |
| NO_jason_reseq | -1.641 | -3.877 |
| B6_jason_reseq | 0.678 | -0.596 |
| MHCII_jason_reseq | 0.414 | -0.565 |
| Isoniazid02 | 0.806 | 0.563 |
| Rifampicin4 | -3.041 | -3.541 |
| Ethambutol3 | -0.494 | -2.182 |
| Meropenem3 | -1.329 | -0.786 |
| Vancomycin16 | -4.067 | -4.51 |
| Rv2680_day32 | 1.061 | 2.417 |
| H37Rv_KO_MarP | -1.49 | -6.0 |
| hypoxia_3wks | 0.283 | -2.767 |
| hypoxia_6wks | 1.159 | -0.228 |
| glycerol | -0.79 | -0.098 |
| cholesterol | -0.371 | 2.214 |
| AJ | -0.771 | -1.276 |
| Bibs02 | -0.166 | 0.993 |
| Bibs02c | -1.129 | 1.306 |
| BL6 | 0.49 | 3.063 |
| BL6a | -0.042 | 2.749 |
| BXD01 | 0.158 | 2.595 |
| BXD010 | 0.675 | 2.438 |
| BXD011 | 1.053 | 2.323 |
| BXD03 | -0.412 | 2.42 |
| BXD04 | -0.477 | 2.446 |
| BXD05 | 0.07 | 3.337 |
| BXD06 | 0.354 | 3.167 |
| BXD07 | 0.523 | 2.933 |
| BXD08 | 0.591 | 2.286 |
| BXD09 | 0.534 | 3.087 |
| CAST | -1.103 | -1.088 |
| CCcont | 0.142 | 3.364 |
| DS01 | -1.391 | 1.001 |
| DS02 | 0.017 | 0.0 |
| DS04 | -1.185 | 1.359 |
| DS0c | 0.349 | 1.298 |
| GP01 | 1.47 | 1.498 |
| GP02 | 0.632 | -0.128 |
| GP0c | 0.571 | 1.031 |
| NOD | -1.811 | -1.061 |
| NZO | -0.841 | -1.263 |
| PWK | -2.663 | -0.786 |
| H37Rv_KO_CtpC | -0.911 | 2.295 |
| H37Rv_KO_CtpD | 0.384 | 1.805 |
| H37Rv_KO_Rv1272 | 0.106 | 2.512 |
| H37Rv_KO_SugABC | -0.126 | 1.815 |
| H37Rv_KO_MbtN | 0.676 | 4.046 |
| Trans05 | 0.666 | 2.172 |
| macrophage_unactivated | -0.862 | 0.076 |
| IL1 | 0.306 | 0.575 |
| Rapamycin | 0.034 | -0.23 |
| Tcell | -2.203 | -0.329 |
| GMCSF | -0.211 | 0.568 |
| IFNab | 0.665 | 1.103 |
| IFNg | 0.275 | 1.563 |
| IFNg_GMCSF1 | 0.104 | 0.575 |
| Rv1432_day32 | 1.624 | 2.996 |
| Rv1565c_day32 | 2.647 | 0.0 |
| secA2_input | -0.584 | -4.612 |
| delta_Rv3594 | 0.788 | 2.299 |
| delta_Rv3717 | 1.402 | 2.896 |
| delta_Rv3811 | 1.071 | 2.019 |
| delta_Rv0954 | 0.225 | 0.358 |
| PonA1 | -1.334 | -0.825 |
| EccD1_KO | -1.983 | -1.766 |
| EspI_KO | -0.234 | -1.634 |
| PE35_KO | -1.155 | -3.246 |
| PPE68_KO | -1.517 | -1.411 |
| glycerol2 | -0.764 | -0.531 |
| lignocerate | -0.451 | -0.462 |
| oleate | -0.146 | -0.537 |
| phosphatidylcholine | -1.242 | -0.531 |
| acetate | -0.015 | 1.15 |
| glucAc | -0.535 | 0.213 |
| Rv0950ko | -0.045 | -6.0 |
| Rv1096ko | -0.072 | -1.176 |
| Rv3684ko | 1.012 | -0.364 |
| delta_otsA_trehalose | -0.717 | 1.066 |