Top 10 genes with highest correlation to Rv2197c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1887/- | (cc=0.7622) | info on Rv1887/- |
| Rv3630/- | (cc=0.6441) | info on Rv3630/- |
| Rv0645c/mmaA1 | (cc=0.5872) | info on Rv0645c/mmaA1 |
| Rv0007/- | (cc=0.559) | info on Rv0007/- |
| Rv0466/- | (cc=0.545) | info on Rv0466/- |
| Rv1491c/- | (cc=0.5395) | info on Rv1491c/- |
| Rv0129c/fbpC | (cc=0.539) | info on Rv0129c/fbpC |
| Rv2190c/- | (cc=0.5346) | info on Rv2190c/- |
| Rv3205c/- | (cc=0.5333) | info on Rv3205c/- |
| Rv1747/- | (cc=0.5202) | info on Rv1747/- |
Correlation of Rv2197c/- with Rv1747/-
Normalized LFCs for Rv2197c/-:
(description and provenance of datasets)
| Rv2197c/- | Rv1747/- | |
| Fe_supp_jason_reseq | -0.458 | 0.118 |
| low_pH_jason_reseq | -0.192 | 0.167 |
| NO_jason_reseq | -1.641 | 1.166 |
| B6_jason_reseq | 0.678 | -0.052 |
| MHCII_jason_reseq | 0.414 | 0.087 |
| Isoniazid02 | 0.806 | -0.182 |
| Rifampicin4 | -3.041 | -2.561 |
| Ethambutol3 | -0.494 | 1.85 |
| Meropenem3 | -1.329 | 0.327 |
| Vancomycin16 | -4.067 | -6.0 |
| Rv2680_day32 | 1.061 | -0.678 |
| H37Rv_KO_MarP | -1.49 | -1.992 |
| hypoxia_3wks | 0.283 | -0.467 |
| hypoxia_6wks | 1.159 | 0.716 |
| glycerol | -0.79 | -0.282 |
| cholesterol | -0.371 | 0.541 |
| AJ | -0.771 | -0.237 |
| Bibs02 | -0.166 | -0.636 |
| Bibs02c | -1.129 | -0.922 |
| BL6 | 0.49 | 0.541 |
| BL6a | -0.042 | -0.482 |
| BXD01 | 0.158 | -0.222 |
| BXD010 | 0.675 | 0.695 |
| BXD011 | 1.053 | 0.332 |
| BXD03 | -0.412 | 0.233 |
| BXD04 | -0.477 | 0.683 |
| BXD05 | 0.07 | 0.382 |
| BXD06 | 0.354 | 0.367 |
| BXD07 | 0.523 | 0.194 |
| BXD08 | 0.591 | 0.258 |
| BXD09 | 0.534 | 0.14 |
| CAST | -1.103 | -0.312 |
| CCcont | 0.142 | -0.104 |
| DS01 | -1.391 | -3.177 |
| DS02 | 0.017 | -2.179 |
| DS04 | -1.185 | -2.041 |
| DS0c | 0.349 | 0.165 |
| GP01 | 1.47 | 0.425 |
| GP02 | 0.632 | 0.282 |
| GP0c | 0.571 | 0.951 |
| NOD | -1.811 | -0.547 |
| NZO | -0.841 | 0.066 |
| PWK | -2.663 | 0.676 |
| H37Rv_KO_CtpC | -0.911 | -0.903 |
| H37Rv_KO_CtpD | 0.384 | -0.632 |
| H37Rv_KO_Rv1272 | 0.106 | 0.111 |
| H37Rv_KO_SugABC | -0.126 | -1.574 |
| H37Rv_KO_MbtN | 0.676 | 1.136 |
| Trans05 | 0.666 | 0.454 |
| macrophage_unactivated | -0.862 | 0.079 |
| IL1 | 0.306 | 0.297 |
| Rapamycin | 0.034 | 0.377 |
| Tcell | -2.203 | -0.544 |
| GMCSF | -0.211 | 0.121 |
| IFNab | 0.665 | 0.986 |
| IFNg | 0.275 | 0.518 |
| IFNg_GMCSF1 | 0.104 | 0.368 |
| Rv1432_day32 | 1.624 | -0.443 |
| Rv1565c_day32 | 2.647 | -0.212 |
| secA2_input | -0.584 | 0.697 |
| delta_Rv3594 | 0.788 | -0.199 |
| delta_Rv3717 | 1.402 | 0.194 |
| delta_Rv3811 | 1.071 | 0.177 |
| delta_Rv0954 | 0.225 | -0.11 |
| PonA1 | -1.334 | -0.771 |
| EccD1_KO | -1.983 | -0.543 |
| EspI_KO | -0.234 | -0.719 |
| PE35_KO | -1.155 | -0.753 |
| PPE68_KO | -1.517 | -0.675 |
| glycerol2 | -0.764 | -1.319 |
| lignocerate | -0.451 | -0.458 |
| oleate | -0.146 | -0.356 |
| phosphatidylcholine | -1.242 | -0.402 |
| acetate | -0.015 | -0.12 |
| glucAc | -0.535 | 0.01 |
| Rv0950ko | -0.045 | 0.226 |
| Rv1096ko | -0.072 | 0.495 |
| Rv3684ko | 1.012 | 0.033 |
| delta_otsA_trehalose | -0.717 | -0.318 |