Top 10 genes with highest correlation to Rv2197c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1887/- | (cc=0.7622) | info on Rv1887/- |
| Rv3630/- | (cc=0.6441) | info on Rv3630/- |
| Rv0645c/mmaA1 | (cc=0.5872) | info on Rv0645c/mmaA1 |
| Rv0007/- | (cc=0.559) | info on Rv0007/- |
| Rv0466/- | (cc=0.545) | info on Rv0466/- |
| Rv1491c/- | (cc=0.5395) | info on Rv1491c/- |
| Rv0129c/fbpC | (cc=0.539) | info on Rv0129c/fbpC |
| Rv2190c/- | (cc=0.5346) | info on Rv2190c/- |
| Rv3205c/- | (cc=0.5333) | info on Rv3205c/- |
| Rv1747/- | (cc=0.5202) | info on Rv1747/- |
Correlation of Rv2197c/- with Rv1887/-
Normalized LFCs for Rv2197c/-:
(description and provenance of datasets)
| Rv2197c/- | Rv1887/- | |
| Fe_supp_jason_reseq | -0.458 | 0.897 |
| low_pH_jason_reseq | -0.192 | 0.405 |
| NO_jason_reseq | -1.641 | -0.627 |
| B6_jason_reseq | 0.678 | 1.156 |
| MHCII_jason_reseq | 0.414 | 0.311 |
| Isoniazid02 | 0.806 | 0.036 |
| Rifampicin4 | -3.041 | -3.287 |
| Ethambutol3 | -0.494 | -0.603 |
| Meropenem3 | -1.329 | -1.264 |
| Vancomycin16 | -4.067 | -2.881 |
| Rv2680_day32 | 1.061 | 0.613 |
| H37Rv_KO_MarP | -1.49 | -0.062 |
| hypoxia_3wks | 0.283 | 0.63 |
| hypoxia_6wks | 1.159 | 0.781 |
| glycerol | -0.79 | 0.181 |
| cholesterol | -0.371 | -0.11 |
| AJ | -0.771 | 0.269 |
| Bibs02 | -0.166 | 0.438 |
| Bibs02c | -1.129 | -0.55 |
| BL6 | 0.49 | 0.06 |
| BL6a | -0.042 | 0.047 |
| BXD01 | 0.158 | -0.016 |
| BXD010 | 0.675 | -0.006 |
| BXD011 | 1.053 | 0.211 |
| BXD03 | -0.412 | -0.056 |
| BXD04 | -0.477 | -0.047 |
| BXD05 | 0.07 | 0.043 |
| BXD06 | 0.354 | -0.344 |
| BXD07 | 0.523 | 0.166 |
| BXD08 | 0.591 | 0.31 |
| BXD09 | 0.534 | 0.238 |
| CAST | -1.103 | -0.289 |
| CCcont | 0.142 | -0.37 |
| DS01 | -1.391 | -0.672 |
| DS02 | 0.017 | -0.701 |
| DS04 | -1.185 | -0.748 |
| DS0c | 0.349 | -0.303 |
| GP01 | 1.47 | 1.109 |
| GP02 | 0.632 | -0.052 |
| GP0c | 0.571 | 0.586 |
| NOD | -1.811 | -0.103 |
| NZO | -0.841 | 0.699 |
| PWK | -2.663 | -1.358 |
| H37Rv_KO_CtpC | -0.911 | -0.242 |
| H37Rv_KO_CtpD | 0.384 | 0.849 |
| H37Rv_KO_Rv1272 | 0.106 | 0.87 |
| H37Rv_KO_SugABC | -0.126 | 0.741 |
| H37Rv_KO_MbtN | 0.676 | -0.083 |
| Trans05 | 0.666 | 0.392 |
| macrophage_unactivated | -0.862 | -0.53 |
| IL1 | 0.306 | -0.16 |
| Rapamycin | 0.034 | 0.101 |
| Tcell | -2.203 | -1.065 |
| GMCSF | -0.211 | -0.557 |
| IFNab | 0.665 | 0.239 |
| IFNg | 0.275 | 0.075 |
| IFNg_GMCSF1 | 0.104 | 0.163 |
| Rv1432_day32 | 1.624 | 0.369 |
| Rv1565c_day32 | 2.647 | 2.993 |
| secA2_input | -0.584 | -0.903 |
| delta_Rv3594 | 0.788 | 0.546 |
| delta_Rv3717 | 1.402 | 0.545 |
| delta_Rv3811 | 1.071 | 0.235 |
| delta_Rv0954 | 0.225 | 0.407 |
| PonA1 | -1.334 | 0.006 |
| EccD1_KO | -1.983 | -0.25 |
| EspI_KO | -0.234 | -0.337 |
| PE35_KO | -1.155 | -0.438 |
| PPE68_KO | -1.517 | -0.429 |
| glycerol2 | -0.764 | -0.133 |
| lignocerate | -0.451 | -0.269 |
| oleate | -0.146 | 0.306 |
| phosphatidylcholine | -1.242 | -0.265 |
| acetate | -0.015 | -0.437 |
| glucAc | -0.535 | 0.022 |
| Rv0950ko | -0.045 | 0.389 |
| Rv1096ko | -0.072 | -0.443 |
| Rv3684ko | 1.012 | -0.059 |
| delta_otsA_trehalose | -0.717 | -0.892 |