Top 10 genes with highest correlation to Rv2160c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2530c/vapC39 | (cc=0.6541) | info on Rv2530c/vapC39 |
| Rv1505c/- | (cc=0.5668) | info on Rv1505c/- |
| Rv2134c/- | (cc=0.5503) | info on Rv2134c/- |
| Rv2569c/- | (cc=0.5472) | info on Rv2569c/- |
| Rv2129c/- | (cc=0.5372) | info on Rv2129c/- |
| Rv2548/vapC19 | (cc=0.5351) | info on Rv2548/vapC19 |
| Rv1059/- | (cc=0.5292) | info on Rv1059/- |
| Rv2231c/cobC | (cc=0.5268) | info on Rv2231c/cobC |
| Rv0112/gca | (cc=0.5205) | info on Rv0112/gca |
| Rv3864/espE | (cc=0.5185) | info on Rv3864/espE |
Correlation of Rv2160c/- with Rv2548/vapC19
Normalized LFCs for Rv2160c/-:
(description and provenance of datasets)
| Rv2160c/- | Rv2548/vapC19 | |
| Fe_supp_jason_reseq | 1.52 | 0.63 |
| low_pH_jason_reseq | 4.352 | -0.087 |
| NO_jason_reseq | 0.753 | -1.124 |
| B6_jason_reseq | -2.842 | -3.129 |
| MHCII_jason_reseq | -1.526 | -1.396 |
| Isoniazid02 | 1.425 | 0.499 |
| Rifampicin4 | 2.532 | -0.403 |
| Ethambutol3 | 1.242 | 0.621 |
| Meropenem3 | 0.734 | 0.034 |
| Vancomycin16 | 1.91 | 0.334 |
| Rv2680_day32 | 1.13 | 0.017 |
| H37Rv_KO_MarP | -1.978 | -0.22 |
| hypoxia_3wks | 0.227 | 0.0 |
| hypoxia_6wks | -0.553 | 0.0 |
| glycerol | -0.709 | -0.961 |
| cholesterol | 0.381 | -0.811 |
| AJ | 1.407 | -0.677 |
| Bibs02 | -0.642 | 2.277 |
| Bibs02c | 0.152 | 0.643 |
| BL6 | 1.405 | 0.661 |
| BL6a | 3.474 | 2.307 |
| BXD01 | 3.406 | 1.936 |
| BXD010 | 2.92 | 1.95 |
| BXD011 | 1.463 | 2.089 |
| BXD03 | 2.676 | 1.217 |
| BXD04 | 3.661 | 1.65 |
| BXD05 | 3.4 | 2.049 |
| BXD06 | 2.323 | 1.943 |
| BXD07 | 3.363 | 2.508 |
| BXD08 | 3.315 | 2.196 |
| BXD09 | 2.959 | 2.123 |
| CAST | -0.809 | -0.752 |
| CCcont | 1.923 | 1.764 |
| DS01 | -0.83 | 0.388 |
| DS02 | -0.764 | 0.54 |
| DS04 | -0.682 | 2.02 |
| DS0c | -0.762 | -1.411 |
| GP01 | 1.484 | 1.199 |
| GP02 | 0.266 | -0.466 |
| GP0c | 2.167 | -0.425 |
| NOD | -0.789 | -0.895 |
| NZO | 1.29 | -1.394 |
| PWK | -0.315 | -0.324 |
| H37Rv_KO_CtpC | 1.404 | 1.218 |
| H37Rv_KO_CtpD | 2.563 | 2.7 |
| H37Rv_KO_Rv1272 | 0.371 | 0.406 |
| H37Rv_KO_SugABC | -0.348 | 0.73 |
| H37Rv_KO_MbtN | 1.018 | 0.076 |
| Trans05 | 1.594 | 1.696 |
| macrophage_unactivated | -0.047 | 0.953 |
| IL1 | -0.481 | 0.575 |
| Rapamycin | 1.043 | -0.654 |
| Tcell | 2.441 | 0.43 |
| GMCSF | 1.65 | 0.349 |
| IFNab | 1.173 | -0.06 |
| IFNg | -0.623 | -0.569 |
| IFNg_GMCSF1 | -0.047 | -0.223 |
| Rv1432_day32 | -0.18 | 0.516 |
| Rv1565c_day32 | 0.218 | 1.193 |
| secA2_input | -2.44 | -1.368 |
| delta_Rv3594 | 2.961 | 0.376 |
| delta_Rv3717 | 1.136 | 0.92 |
| delta_Rv3811 | 1.187 | 0.526 |
| delta_Rv0954 | 2.37 | -0.634 |
| PonA1 | 3.066 | -1.604 |
| EccD1_KO | 0.352 | -0.622 |
| EspI_KO | -1.996 | -0.761 |
| PE35_KO | -1.105 | -0.303 |
| PPE68_KO | -0.294 | -0.218 |
| glycerol2 | 0.42 | 0.388 |
| lignocerate | -0.695 | 0.218 |
| oleate | 1.113 | 0.302 |
| phosphatidylcholine | 0.336 | 0.515 |
| acetate | -1.93 | 0.148 |
| glucAc | -3.427 | -0.355 |
| Rv0950ko | -1.405 | -1.447 |
| Rv1096ko | 1.61 | -1.176 |
| Rv3684ko | -1.755 | -1.402 |
| delta_otsA_trehalose | 0.654 | 0.134 |