Top 10 genes with highest correlation to Rv2160c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2530c/vapC39 | (cc=0.6541) | info on Rv2530c/vapC39 |
| Rv1505c/- | (cc=0.5668) | info on Rv1505c/- |
| Rv2134c/- | (cc=0.5503) | info on Rv2134c/- |
| Rv2569c/- | (cc=0.5472) | info on Rv2569c/- |
| Rv2129c/- | (cc=0.5372) | info on Rv2129c/- |
| Rv2548/vapC19 | (cc=0.5351) | info on Rv2548/vapC19 |
| Rv1059/- | (cc=0.5292) | info on Rv1059/- |
| Rv2231c/cobC | (cc=0.5268) | info on Rv2231c/cobC |
| Rv0112/gca | (cc=0.5205) | info on Rv0112/gca |
| Rv3864/espE | (cc=0.5185) | info on Rv3864/espE |
Correlation of Rv2160c/- with Rv0112/gca
Normalized LFCs for Rv2160c/-:
(description and provenance of datasets)
| Rv2160c/- | Rv0112/gca | |
| Fe_supp_jason_reseq | 1.52 | 0.415 |
| low_pH_jason_reseq | 4.352 | 1.335 |
| NO_jason_reseq | 0.753 | 0.171 |
| B6_jason_reseq | -2.842 | 0.292 |
| MHCII_jason_reseq | -1.526 | -0.342 |
| Isoniazid02 | 1.425 | 0.636 |
| Rifampicin4 | 2.532 | -0.165 |
| Ethambutol3 | 1.242 | 1.454 |
| Meropenem3 | 0.734 | -0.359 |
| Vancomycin16 | 1.91 | 0.157 |
| Rv2680_day32 | 1.13 | -0.383 |
| H37Rv_KO_MarP | -1.978 | -0.223 |
| hypoxia_3wks | 0.227 | 0.53 |
| hypoxia_6wks | -0.553 | 0.142 |
| glycerol | -0.709 | -0.753 |
| cholesterol | 0.381 | -0.469 |
| AJ | 1.407 | 1.239 |
| Bibs02 | -0.642 | -0.682 |
| Bibs02c | 0.152 | 0.887 |
| BL6 | 1.405 | 0.839 |
| BL6a | 3.474 | 1.663 |
| BXD01 | 3.406 | 1.652 |
| BXD010 | 2.92 | 1.81 |
| BXD011 | 1.463 | 2.088 |
| BXD03 | 2.676 | 1.673 |
| BXD04 | 3.661 | 0.581 |
| BXD05 | 3.4 | 0.747 |
| BXD06 | 2.323 | 1.26 |
| BXD07 | 3.363 | 1.073 |
| BXD08 | 3.315 | 0.987 |
| BXD09 | 2.959 | 1.384 |
| CAST | -0.809 | 0.569 |
| CCcont | 1.923 | 0.701 |
| DS01 | -0.83 | 0.236 |
| DS02 | -0.764 | 0.711 |
| DS04 | -0.682 | 0.254 |
| DS0c | -0.762 | 0.815 |
| GP01 | 1.484 | 0.067 |
| GP02 | 0.266 | 0.109 |
| GP0c | 2.167 | 1.478 |
| NOD | -0.789 | 1.054 |
| NZO | 1.29 | 0.548 |
| PWK | -0.315 | 1.088 |
| H37Rv_KO_CtpC | 1.404 | 0.966 |
| H37Rv_KO_CtpD | 2.563 | 1.023 |
| H37Rv_KO_Rv1272 | 0.371 | 1.427 |
| H37Rv_KO_SugABC | -0.348 | 0.976 |
| H37Rv_KO_MbtN | 1.018 | 1.612 |
| Trans05 | 1.594 | 2.074 |
| macrophage_unactivated | -0.047 | 0.139 |
| IL1 | -0.481 | 0.0 |
| Rapamycin | 1.043 | 0.203 |
| Tcell | 2.441 | 0.554 |
| GMCSF | 1.65 | 0.655 |
| IFNab | 1.173 | -0.429 |
| IFNg | -0.623 | 0.345 |
| IFNg_GMCSF1 | -0.047 | 0.779 |
| Rv1432_day32 | -0.18 | -0.164 |
| Rv1565c_day32 | 0.218 | 0.065 |
| secA2_input | -2.44 | -1.342 |
| delta_Rv3594 | 2.961 | 0.035 |
| delta_Rv3717 | 1.136 | 0.141 |
| delta_Rv3811 | 1.187 | -0.219 |
| delta_Rv0954 | 2.37 | -0.726 |
| PonA1 | 3.066 | 0.382 |
| EccD1_KO | 0.352 | -0.572 |
| EspI_KO | -1.996 | -1.132 |
| PE35_KO | -1.105 | -0.755 |
| PPE68_KO | -0.294 | -0.691 |
| glycerol2 | 0.42 | -0.234 |
| lignocerate | -0.695 | -0.374 |
| oleate | 1.113 | 0.474 |
| phosphatidylcholine | 0.336 | -0.056 |
| acetate | -1.93 | -0.17 |
| glucAc | -3.427 | -0.722 |
| Rv0950ko | -1.405 | 0.374 |
| Rv1096ko | 1.61 | -0.48 |
| Rv3684ko | -1.755 | -0.599 |
| delta_otsA_trehalose | 0.654 | 2.09 |