Top 10 genes with highest correlation to Rv2160c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2530c/vapC39 | (cc=0.6541) | info on Rv2530c/vapC39 |
| Rv1505c/- | (cc=0.5668) | info on Rv1505c/- |
| Rv2134c/- | (cc=0.5503) | info on Rv2134c/- |
| Rv2569c/- | (cc=0.5472) | info on Rv2569c/- |
| Rv2129c/- | (cc=0.5372) | info on Rv2129c/- |
| Rv2548/vapC19 | (cc=0.5351) | info on Rv2548/vapC19 |
| Rv1059/- | (cc=0.5292) | info on Rv1059/- |
| Rv2231c/cobC | (cc=0.5268) | info on Rv2231c/cobC |
| Rv0112/gca | (cc=0.5205) | info on Rv0112/gca |
| Rv3864/espE | (cc=0.5185) | info on Rv3864/espE |
Correlation of Rv2160c/- with Rv2134c/-
Normalized LFCs for Rv2160c/-:
(description and provenance of datasets)
| Rv2160c/- | Rv2134c/- | |
| Fe_supp_jason_reseq | 1.52 | 0.297 |
| low_pH_jason_reseq | 4.352 | 1.402 |
| NO_jason_reseq | 0.753 | -0.142 |
| B6_jason_reseq | -2.842 | -0.671 |
| MHCII_jason_reseq | -1.526 | -1.365 |
| Isoniazid02 | 1.425 | 1.529 |
| Rifampicin4 | 2.532 | 0.07 |
| Ethambutol3 | 1.242 | -0.032 |
| Meropenem3 | 0.734 | -0.25 |
| Vancomycin16 | 1.91 | -0.361 |
| Rv2680_day32 | 1.13 | 0.576 |
| H37Rv_KO_MarP | -1.978 | 0.164 |
| hypoxia_3wks | 0.227 | 0.79 |
| hypoxia_6wks | -0.553 | 0.449 |
| glycerol | -0.709 | 1.514 |
| cholesterol | 0.381 | 0.072 |
| AJ | 1.407 | 2.664 |
| Bibs02 | -0.642 | 0.135 |
| Bibs02c | 0.152 | 0.053 |
| BL6 | 1.405 | 1.098 |
| BL6a | 3.474 | 1.845 |
| BXD01 | 3.406 | 1.944 |
| BXD010 | 2.92 | 0.894 |
| BXD011 | 1.463 | 1.787 |
| BXD03 | 2.676 | 2.13 |
| BXD04 | 3.661 | 2.684 |
| BXD05 | 3.4 | 1.601 |
| BXD06 | 2.323 | 1.723 |
| BXD07 | 3.363 | 1.997 |
| BXD08 | 3.315 | 1.765 |
| BXD09 | 2.959 | 1.672 |
| CAST | -0.809 | -0.06 |
| CCcont | 1.923 | 2.265 |
| DS01 | -0.83 | -0.123 |
| DS02 | -0.764 | -0.635 |
| DS04 | -0.682 | 0.738 |
| DS0c | -0.762 | 0.707 |
| GP01 | 1.484 | 1.676 |
| GP02 | 0.266 | 0.119 |
| GP0c | 2.167 | 1.772 |
| NOD | -0.789 | 2.185 |
| NZO | 1.29 | 2.438 |
| PWK | -0.315 | 0.526 |
| H37Rv_KO_CtpC | 1.404 | 0.646 |
| H37Rv_KO_CtpD | 2.563 | 2.104 |
| H37Rv_KO_Rv1272 | 0.371 | 0.767 |
| H37Rv_KO_SugABC | -0.348 | 0.539 |
| H37Rv_KO_MbtN | 1.018 | 2.6 |
| Trans05 | 1.594 | 2.043 |
| macrophage_unactivated | -0.047 | 0.297 |
| IL1 | -0.481 | -1.089 |
| Rapamycin | 1.043 | -0.417 |
| Tcell | 2.441 | 0.052 |
| GMCSF | 1.65 | -0.129 |
| IFNab | 1.173 | 1.376 |
| IFNg | -0.623 | -0.818 |
| IFNg_GMCSF1 | -0.047 | -0.657 |
| Rv1432_day32 | -0.18 | -0.442 |
| Rv1565c_day32 | 0.218 | -0.518 |
| secA2_input | -2.44 | -1.199 |
| delta_Rv3594 | 2.961 | 1.104 |
| delta_Rv3717 | 1.136 | 0.985 |
| delta_Rv3811 | 1.187 | 1.38 |
| delta_Rv0954 | 2.37 | 1.147 |
| PonA1 | 3.066 | -1.337 |
| EccD1_KO | 0.352 | -0.276 |
| EspI_KO | -1.996 | -0.653 |
| PE35_KO | -1.105 | -0.586 |
| PPE68_KO | -0.294 | -0.921 |
| glycerol2 | 0.42 | -0.214 |
| lignocerate | -0.695 | -0.725 |
| oleate | 1.113 | -1.345 |
| phosphatidylcholine | 0.336 | -1.246 |
| acetate | -1.93 | 0.118 |
| glucAc | -3.427 | -0.055 |
| Rv0950ko | -1.405 | 0.0 |
| Rv1096ko | 1.61 | -1.71 |
| Rv3684ko | -1.755 | -2.122 |
| delta_otsA_trehalose | 0.654 | -0.164 |