Top 10 genes with highest correlation to Rv2160c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2530c/vapC39 | (cc=0.6541) | info on Rv2530c/vapC39 |
| Rv1505c/- | (cc=0.5668) | info on Rv1505c/- |
| Rv2134c/- | (cc=0.5503) | info on Rv2134c/- |
| Rv2569c/- | (cc=0.5472) | info on Rv2569c/- |
| Rv2129c/- | (cc=0.5372) | info on Rv2129c/- |
| Rv2548/vapC19 | (cc=0.5351) | info on Rv2548/vapC19 |
| Rv1059/- | (cc=0.5292) | info on Rv1059/- |
| Rv2231c/cobC | (cc=0.5268) | info on Rv2231c/cobC |
| Rv0112/gca | (cc=0.5205) | info on Rv0112/gca |
| Rv3864/espE | (cc=0.5185) | info on Rv3864/espE |
Correlation of Rv2160c/- with Rv1505c/-
Normalized LFCs for Rv2160c/-:
(description and provenance of datasets)
| Rv2160c/- | Rv1505c/- | |
| Fe_supp_jason_reseq | 1.52 | 0.398 |
| low_pH_jason_reseq | 4.352 | -0.35 |
| NO_jason_reseq | 0.753 | 0.247 |
| B6_jason_reseq | -2.842 | -1.795 |
| MHCII_jason_reseq | -1.526 | -1.356 |
| Isoniazid02 | 1.425 | 1.695 |
| Rifampicin4 | 2.532 | -0.244 |
| Ethambutol3 | 1.242 | 0.896 |
| Meropenem3 | 0.734 | -0.284 |
| Vancomycin16 | 1.91 | 0.0 |
| Rv2680_day32 | 1.13 | -0.332 |
| H37Rv_KO_MarP | -1.978 | -0.579 |
| hypoxia_3wks | 0.227 | -0.144 |
| hypoxia_6wks | -0.553 | 0.0 |
| glycerol | -0.709 | -0.396 |
| cholesterol | 0.381 | -0.847 |
| AJ | 1.407 | -0.071 |
| Bibs02 | -0.642 | 0.604 |
| Bibs02c | 0.152 | -0.567 |
| BL6 | 1.405 | 1.544 |
| BL6a | 3.474 | 1.908 |
| BXD01 | 3.406 | 1.315 |
| BXD010 | 2.92 | 1.351 |
| BXD011 | 1.463 | 1.424 |
| BXD03 | 2.676 | 1.73 |
| BXD04 | 3.661 | 1.686 |
| BXD05 | 3.4 | 1.878 |
| BXD06 | 2.323 | 2.076 |
| BXD07 | 3.363 | 1.562 |
| BXD08 | 3.315 | 1.373 |
| BXD09 | 2.959 | 2.422 |
| CAST | -0.809 | 0.709 |
| CCcont | 1.923 | 1.366 |
| DS01 | -0.83 | 0.204 |
| DS02 | -0.764 | -1.511 |
| DS04 | -0.682 | 0.641 |
| DS0c | -0.762 | -0.506 |
| GP01 | 1.484 | 0.539 |
| GP02 | 0.266 | 0.938 |
| GP0c | 2.167 | 0.511 |
| NOD | -0.789 | 2.294 |
| NZO | 1.29 | -0.786 |
| PWK | -0.315 | 0.274 |
| H37Rv_KO_CtpC | 1.404 | 1.294 |
| H37Rv_KO_CtpD | 2.563 | 2.274 |
| H37Rv_KO_Rv1272 | 0.371 | 1.29 |
| H37Rv_KO_SugABC | -0.348 | -0.748 |
| H37Rv_KO_MbtN | 1.018 | 1.363 |
| Trans05 | 1.594 | 1.179 |
| macrophage_unactivated | -0.047 | 0.167 |
| IL1 | -0.481 | 0.489 |
| Rapamycin | 1.043 | 0.203 |
| Tcell | 2.441 | 0.73 |
| GMCSF | 1.65 | -0.219 |
| IFNab | 1.173 | 0.16 |
| IFNg | -0.623 | -0.072 |
| IFNg_GMCSF1 | -0.047 | 0.167 |
| Rv1432_day32 | -0.18 | 0.288 |
| Rv1565c_day32 | 0.218 | -0.292 |
| secA2_input | -2.44 | -1.018 |
| delta_Rv3594 | 2.961 | 0.197 |
| delta_Rv3717 | 1.136 | -0.56 |
| delta_Rv3811 | 1.187 | 0.223 |
| delta_Rv0954 | 2.37 | 0.656 |
| PonA1 | 3.066 | -0.164 |
| EccD1_KO | 0.352 | 0.059 |
| EspI_KO | -1.996 | -0.163 |
| PE35_KO | -1.105 | -0.055 |
| PPE68_KO | -0.294 | -0.368 |
| glycerol2 | 0.42 | -0.488 |
| lignocerate | -0.695 | -0.477 |
| oleate | 1.113 | -0.432 |
| phosphatidylcholine | 0.336 | -0.098 |
| acetate | -1.93 | -0.848 |
| glucAc | -3.427 | -1.106 |
| Rv0950ko | -1.405 | 0.6 |
| Rv1096ko | 1.61 | -0.525 |
| Rv3684ko | -1.755 | 0.311 |
| delta_otsA_trehalose | 0.654 | 1.395 |