Top 10 genes with highest correlation to Rv2160c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2530c/vapC39 | (cc=0.6541) | info on Rv2530c/vapC39 |
| Rv1505c/- | (cc=0.5668) | info on Rv1505c/- |
| Rv2134c/- | (cc=0.5503) | info on Rv2134c/- |
| Rv2569c/- | (cc=0.5472) | info on Rv2569c/- |
| Rv2129c/- | (cc=0.5372) | info on Rv2129c/- |
| Rv2548/vapC19 | (cc=0.5351) | info on Rv2548/vapC19 |
| Rv1059/- | (cc=0.5292) | info on Rv1059/- |
| Rv2231c/cobC | (cc=0.5268) | info on Rv2231c/cobC |
| Rv0112/gca | (cc=0.5205) | info on Rv0112/gca |
| Rv3864/espE | (cc=0.5185) | info on Rv3864/espE |
Correlation of Rv2160c/- with Rv2231c/cobC
Normalized LFCs for Rv2160c/-:
(description and provenance of datasets)
| Rv2160c/- | Rv2231c/cobC | |
| Fe_supp_jason_reseq | 1.52 | -0.463 |
| low_pH_jason_reseq | 4.352 | -0.1 |
| NO_jason_reseq | 0.753 | -0.079 |
| B6_jason_reseq | -2.842 | -1.435 |
| MHCII_jason_reseq | -1.526 | -0.893 |
| Isoniazid02 | 1.425 | -0.581 |
| Rifampicin4 | 2.532 | 0.133 |
| Ethambutol3 | 1.242 | -0.158 |
| Meropenem3 | 0.734 | -0.363 |
| Vancomycin16 | 1.91 | -0.568 |
| Rv2680_day32 | 1.13 | 0.811 |
| H37Rv_KO_MarP | -1.978 | -1.507 |
| hypoxia_3wks | 0.227 | 0.467 |
| hypoxia_6wks | -0.553 | 1.205 |
| glycerol | -0.709 | 0.162 |
| cholesterol | 0.381 | -0.264 |
| AJ | 1.407 | -0.424 |
| Bibs02 | -0.642 | 0.946 |
| Bibs02c | 0.152 | -0.182 |
| BL6 | 1.405 | 0.477 |
| BL6a | 3.474 | 1.122 |
| BXD01 | 3.406 | 1.214 |
| BXD010 | 2.92 | 0.629 |
| BXD011 | 1.463 | 1.498 |
| BXD03 | 2.676 | 1.088 |
| BXD04 | 3.661 | 2.739 |
| BXD05 | 3.4 | 1.863 |
| BXD06 | 2.323 | 1.947 |
| BXD07 | 3.363 | 1.383 |
| BXD08 | 3.315 | 2.292 |
| BXD09 | 2.959 | 1.614 |
| CAST | -0.809 | -0.791 |
| CCcont | 1.923 | 1.202 |
| DS01 | -0.83 | 0.0 |
| DS02 | -0.764 | -0.189 |
| DS04 | -0.682 | -0.453 |
| DS0c | -0.762 | 1.383 |
| GP01 | 1.484 | 0.0 |
| GP02 | 0.266 | -0.286 |
| GP0c | 2.167 | -0.113 |
| NOD | -0.789 | -0.905 |
| NZO | 1.29 | 1.225 |
| PWK | -0.315 | -0.171 |
| H37Rv_KO_CtpC | 1.404 | 0.571 |
| H37Rv_KO_CtpD | 2.563 | -0.591 |
| H37Rv_KO_Rv1272 | 0.371 | 1.338 |
| H37Rv_KO_SugABC | -0.348 | 0.586 |
| H37Rv_KO_MbtN | 1.018 | 1.226 |
| Trans05 | 1.594 | 1.536 |
| macrophage_unactivated | -0.047 | 1.922 |
| IL1 | -0.481 | 1.139 |
| Rapamycin | 1.043 | 1.669 |
| Tcell | 2.441 | 1.189 |
| GMCSF | 1.65 | 1.014 |
| IFNab | 1.173 | 0.683 |
| IFNg | -0.623 | 0.82 |
| IFNg_GMCSF1 | -0.047 | 1.546 |
| Rv1432_day32 | -0.18 | -0.618 |
| Rv1565c_day32 | 0.218 | -1.989 |
| secA2_input | -2.44 | -0.62 |
| delta_Rv3594 | 2.961 | 2.709 |
| delta_Rv3717 | 1.136 | 2.718 |
| delta_Rv3811 | 1.187 | 2.314 |
| delta_Rv0954 | 2.37 | 1.773 |
| PonA1 | 3.066 | 1.506 |
| EccD1_KO | 0.352 | 0.201 |
| EspI_KO | -1.996 | -0.787 |
| PE35_KO | -1.105 | 0.265 |
| PPE68_KO | -0.294 | 0.099 |
| glycerol2 | 0.42 | 0.0 |
| lignocerate | -0.695 | 0.082 |
| oleate | 1.113 | 0.539 |
| phosphatidylcholine | 0.336 | 0.213 |
| acetate | -1.93 | -0.283 |
| glucAc | -3.427 | -0.405 |
| Rv0950ko | -1.405 | 0.395 |
| Rv1096ko | 1.61 | 0.202 |
| Rv3684ko | -1.755 | 0.0 |
| delta_otsA_trehalose | 0.654 | 0.58 |