Top 10 genes with highest correlation to Rv2160c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2530c/vapC39 | (cc=0.6541) | info on Rv2530c/vapC39 |
| Rv1505c/- | (cc=0.5668) | info on Rv1505c/- |
| Rv2134c/- | (cc=0.5503) | info on Rv2134c/- |
| Rv2569c/- | (cc=0.5472) | info on Rv2569c/- |
| Rv2129c/- | (cc=0.5372) | info on Rv2129c/- |
| Rv2548/vapC19 | (cc=0.5351) | info on Rv2548/vapC19 |
| Rv1059/- | (cc=0.5292) | info on Rv1059/- |
| Rv2231c/cobC | (cc=0.5268) | info on Rv2231c/cobC |
| Rv0112/gca | (cc=0.5205) | info on Rv0112/gca |
| Rv3864/espE | (cc=0.5185) | info on Rv3864/espE |
Correlation of Rv2160c/- with Rv2530c/vapC39
Normalized LFCs for Rv2160c/-:
(description and provenance of datasets)
| Rv2160c/- | Rv2530c/vapC39 | |
| Fe_supp_jason_reseq | 1.52 | 2.021 |
| low_pH_jason_reseq | 4.352 | 1.586 |
| NO_jason_reseq | 0.753 | -0.281 |
| B6_jason_reseq | -2.842 | -0.538 |
| MHCII_jason_reseq | -1.526 | -0.217 |
| Isoniazid02 | 1.425 | 0.546 |
| Rifampicin4 | 2.532 | 0.474 |
| Ethambutol3 | 1.242 | -0.089 |
| Meropenem3 | 0.734 | -0.053 |
| Vancomycin16 | 1.91 | 1.305 |
| Rv2680_day32 | 1.13 | 1.701 |
| H37Rv_KO_MarP | -1.978 | -0.165 |
| hypoxia_3wks | 0.227 | 0.187 |
| hypoxia_6wks | -0.553 | -0.228 |
| glycerol | -0.709 | 1.463 |
| cholesterol | 0.381 | 0.0 |
| AJ | 1.407 | 0.0 |
| Bibs02 | -0.642 | 0.0 |
| Bibs02c | 0.152 | 0.0 |
| BL6 | 1.405 | 0.0 |
| BL6a | 3.474 | 3.566 |
| BXD01 | 3.406 | 3.731 |
| BXD010 | 2.92 | 3.969 |
| BXD011 | 1.463 | 2.955 |
| BXD03 | 2.676 | 1.849 |
| BXD04 | 3.661 | 2.75 |
| BXD05 | 3.4 | 3.385 |
| BXD06 | 2.323 | 3.49 |
| BXD07 | 3.363 | 3.809 |
| BXD08 | 3.315 | 2.491 |
| BXD09 | 2.959 | 3.016 |
| CAST | -0.809 | 0.23 |
| CCcont | 1.923 | 0.285 |
| DS01 | -0.83 | 0.0 |
| DS02 | -0.764 | 0.0 |
| DS04 | -0.682 | 0.533 |
| DS0c | -0.762 | 0.0 |
| GP01 | 1.484 | 1.43 |
| GP02 | 0.266 | 2.139 |
| GP0c | 2.167 | 3.221 |
| NOD | -0.789 | 0.225 |
| NZO | 1.29 | 0.0 |
| PWK | -0.315 | 0.0 |
| H37Rv_KO_CtpC | 1.404 | 4.288 |
| H37Rv_KO_CtpD | 2.563 | 5.372 |
| H37Rv_KO_Rv1272 | 0.371 | 0.495 |
| H37Rv_KO_SugABC | -0.348 | 0.272 |
| H37Rv_KO_MbtN | 1.018 | 0.437 |
| Trans05 | 1.594 | 4.469 |
| macrophage_unactivated | -0.047 | 2.5 |
| IL1 | -0.481 | 0.492 |
| Rapamycin | 1.043 | 0.411 |
| Tcell | 2.441 | 2.9 |
| GMCSF | 1.65 | -1.735 |
| IFNab | 1.173 | 1.587 |
| IFNg | -0.623 | -0.294 |
| IFNg_GMCSF1 | -0.047 | 3.086 |
| Rv1432_day32 | -0.18 | 0.0 |
| Rv1565c_day32 | 0.218 | 0.218 |
| secA2_input | -2.44 | 0.294 |
| delta_Rv3594 | 2.961 | 1.667 |
| delta_Rv3717 | 1.136 | 0.635 |
| delta_Rv3811 | 1.187 | 2.214 |
| delta_Rv0954 | 2.37 | 1.858 |
| PonA1 | 3.066 | 3.233 |
| EccD1_KO | 0.352 | -2.684 |
| EspI_KO | -1.996 | 1.241 |
| PE35_KO | -1.105 | 0.823 |
| PPE68_KO | -0.294 | -0.106 |
| glycerol2 | 0.42 | -0.42 |
| lignocerate | -0.695 | -1.112 |
| oleate | 1.113 | 1.036 |
| phosphatidylcholine | 0.336 | 0.366 |
| acetate | -1.93 | -1.44 |
| glucAc | -3.427 | -3.978 |
| Rv0950ko | -1.405 | 0.691 |
| Rv1096ko | 1.61 | 0.513 |
| Rv3684ko | -1.755 | -0.305 |
| delta_otsA_trehalose | 0.654 | -0.503 |