Top 10 genes with highest correlation to Rv2086/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0443/- | (cc=0.4875) | info on Rv0443/- |
| Rv3197A/whiB7 | (cc=0.4797) | info on Rv3197A/whiB7 |
| Rv1686c/- | (cc=0.4743) | info on Rv1686c/- |
| Rv1880c/cyp140 | (cc=0.4637) | info on Rv1880c/cyp140 |
| Rv1737c/narK2 | (cc=0.44) | info on Rv1737c/narK2 |
| Rv1263/amiB2 | (cc=0.4343) | info on Rv1263/amiB2 |
| Rv1960c/parD1 | (cc=0.424) | info on Rv1960c/parD1 |
| Rv1087/PE_PGRS21 | (cc=0.4232) | info on Rv1087/PE_PGRS21 |
| Rv1818c/PE_PGRS33 | (cc=0.4221) | info on Rv1818c/PE_PGRS33 |
| Rv0649/fabD2 | (cc=0.4211) | info on Rv0649/fabD2 |
Correlation of Rv2086/- with Rv1737c/narK2
Normalized LFCs for Rv2086/-:
(description and provenance of datasets)
| Rv2086/- | Rv1737c/narK2 | |
| Fe_supp_jason_reseq | -3.309 | 0.12 |
| low_pH_jason_reseq | -0.694 | -0.552 |
| NO_jason_reseq | -0.286 | 0.2 |
| B6_jason_reseq | -1.244 | 0.269 |
| MHCII_jason_reseq | -1.023 | 0.394 |
| Isoniazid02 | 0.368 | 0.176 |
| Rifampicin4 | 0.054 | 0.409 |
| Ethambutol3 | 0.406 | 2.065 |
| Meropenem3 | -0.428 | -0.213 |
| Vancomycin16 | 0.398 | -0.159 |
| Rv2680_day32 | 2.066 | 0.585 |
| H37Rv_KO_MarP | -0.409 | 0.0 |
| hypoxia_3wks | -1.049 | -0.407 |
| hypoxia_6wks | -0.616 | 0.535 |
| glycerol | -0.607 | 0.714 |
| cholesterol | 0.435 | 0.767 |
| AJ | -0.644 | 0.131 |
| Bibs02 | -0.065 | 1.18 |
| Bibs02c | -0.58 | -0.979 |
| BL6 | -1.093 | -1.081 |
| BL6a | -1.505 | -1.296 |
| BXD01 | -0.221 | -0.566 |
| BXD010 | -0.76 | -0.599 |
| BXD011 | -0.353 | -1.143 |
| BXD03 | -1.701 | -1.02 |
| BXD04 | 0.063 | -1.198 |
| BXD05 | -1.072 | -0.742 |
| BXD06 | -0.922 | -0.467 |
| BXD07 | -0.517 | -1.003 |
| BXD08 | 0.067 | -0.782 |
| BXD09 | -0.596 | -0.28 |
| CAST | 1.003 | 0.414 |
| CCcont | -0.194 | -0.338 |
| DS01 | -0.71 | -0.534 |
| DS02 | -2.28 | 0.167 |
| DS04 | 1.154 | 0.349 |
| DS0c | 0.0 | -0.85 |
| GP01 | 0.548 | 1.771 |
| GP02 | 1.721 | 0.348 |
| GP0c | 1.753 | -0.057 |
| NOD | 0.586 | 1.189 |
| NZO | -0.952 | 0.0 |
| PWK | 1.006 | 0.725 |
| H37Rv_KO_CtpC | 0.055 | -0.52 |
| H37Rv_KO_CtpD | -1.75 | 0.273 |
| H37Rv_KO_Rv1272 | 0.598 | -0.411 |
| H37Rv_KO_SugABC | -1.583 | -1.945 |
| H37Rv_KO_MbtN | -0.154 | -0.35 |
| Trans05 | 0.584 | -0.393 |
| macrophage_unactivated | -0.805 | -0.294 |
| IL1 | -1.51 | -1.172 |
| Rapamycin | -2.725 | -0.592 |
| Tcell | 0.124 | -0.798 |
| GMCSF | 1.296 | -0.647 |
| IFNab | -0.632 | -0.795 |
| IFNg | -1.513 | -1.387 |
| IFNg_GMCSF1 | -1.103 | -0.5 |
| Rv1432_day32 | 1.269 | 0.297 |
| Rv1565c_day32 | 0.0 | 0.674 |
| secA2_input | -0.875 | 0.23 |
| delta_Rv3594 | -0.644 | -0.684 |
| delta_Rv3717 | -0.849 | -0.024 |
| delta_Rv3811 | 0.125 | -0.251 |
| delta_Rv0954 | -1.226 | -1.366 |
| PonA1 | -0.568 | -0.753 |
| EccD1_KO | 0.224 | 1.411 |
| EspI_KO | -0.821 | 0.265 |
| PE35_KO | 0.198 | 1.21 |
| PPE68_KO | 0.269 | 1.597 |
| glycerol2 | 0.349 | 0.373 |
| lignocerate | 1.062 | 0.81 |
| oleate | -0.38 | 0.043 |
| phosphatidylcholine | 0.381 | 0.717 |
| acetate | 0.667 | 0.442 |
| glucAc | 1.062 | 0.594 |
| Rv0950ko | 0.865 | 0.501 |
| Rv1096ko | 0.986 | 0.19 |
| Rv3684ko | -1.605 | -0.439 |
| delta_otsA_trehalose | 3.188 | 0.62 |