Top 10 genes with highest correlation to Rv2086/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv0443/- | (cc=0.4875) | info on Rv0443/- |
Rv3197A/whiB7 | (cc=0.4797) | info on Rv3197A/whiB7 |
Rv1686c/- | (cc=0.4743) | info on Rv1686c/- |
Rv1880c/cyp140 | (cc=0.4637) | info on Rv1880c/cyp140 |
Rv1737c/narK2 | (cc=0.44) | info on Rv1737c/narK2 |
Rv1263/amiB2 | (cc=0.4343) | info on Rv1263/amiB2 |
Rv1960c/parD1 | (cc=0.424) | info on Rv1960c/parD1 |
Rv1087/PE_PGRS21 | (cc=0.4232) | info on Rv1087/PE_PGRS21 |
Rv1818c/PE_PGRS33 | (cc=0.4221) | info on Rv1818c/PE_PGRS33 |
Rv0649/fabD2 | (cc=0.4211) | info on Rv0649/fabD2 |
Correlation of Rv2086/- with Rv0649/fabD2
Normalized LFCs for Rv2086/-:
(description and provenance of datasets)
Rv2086/- | Rv0649/fabD2 | |
Fe_supp_jason_reseq | -3.309 | -1.773 |
low_pH_jason_reseq | -0.694 | -2.946 |
NO_jason_reseq | -0.286 | -2.444 |
B6_jason_reseq | -1.244 | -0.889 |
MHCII_jason_reseq | -1.023 | 0.58 |
Isoniazid02 | 0.368 | 3.067 |
Rifampicin4 | 0.054 | 0.772 |
Ethambutol3 | 0.406 | 1.058 |
Meropenem3 | -0.428 | 0.952 |
Vancomycin16 | 0.398 | -0.135 |
Rv2680_day32 | 2.066 | 2.793 |
H37Rv_KO_MarP | -0.409 | -0.865 |
hypoxia_3wks | -1.049 | -2.588 |
hypoxia_6wks | -0.616 | -2.658 |
glycerol | -0.607 | 1.837 |
cholesterol | 0.435 | 1.356 |
AJ | -0.644 | 0.647 |
Bibs02 | -0.065 | 3.449 |
Bibs02c | -0.58 | 1.904 |
BL6 | -1.093 | -1.637 |
BL6a | -1.505 | -0.27 |
BXD01 | -0.221 | 0.929 |
BXD010 | -0.76 | -0.056 |
BXD011 | -0.353 | -0.745 |
BXD03 | -1.701 | 0.639 |
BXD04 | 0.063 | -0.11 |
BXD05 | -1.072 | -0.947 |
BXD06 | -0.922 | -1.182 |
BXD07 | -0.517 | -0.617 |
BXD08 | 0.067 | -1.113 |
BXD09 | -0.596 | -0.58 |
CAST | 1.003 | 0.926 |
CCcont | -0.194 | 0.236 |
DS01 | -0.71 | -0.44 |
DS02 | -2.28 | 1.356 |
DS04 | 1.154 | 0.082 |
DS0c | 0.0 | -0.094 |
GP01 | 0.548 | 1.694 |
GP02 | 1.721 | 1.051 |
GP0c | 1.753 | 0.465 |
NOD | 0.586 | 0.272 |
NZO | -0.952 | -0.824 |
PWK | 1.006 | -1.38 |
H37Rv_KO_CtpC | 0.055 | -1.522 |
H37Rv_KO_CtpD | -1.75 | -0.65 |
H37Rv_KO_Rv1272 | 0.598 | 0.371 |
H37Rv_KO_SugABC | -1.583 | -0.783 |
H37Rv_KO_MbtN | -0.154 | 0.084 |
Trans05 | 0.584 | -0.21 |
macrophage_unactivated | -0.805 | -1.626 |
IL1 | -1.51 | -4.494 |
Rapamycin | -2.725 | -4.342 |
Tcell | 0.124 | -2.023 |
GMCSF | 1.296 | -1.946 |
IFNab | -0.632 | -5.629 |
IFNg | -1.513 | -4.049 |
IFNg_GMCSF1 | -1.103 | -1.951 |
Rv1432_day32 | 1.269 | 1.442 |
Rv1565c_day32 | 0.0 | 1.29 |
secA2_input | -0.875 | 2.204 |
delta_Rv3594 | -0.644 | 0.367 |
delta_Rv3717 | -0.849 | 0.388 |
delta_Rv3811 | 0.125 | -1.13 |
delta_Rv0954 | -1.226 | -2.087 |
PonA1 | -0.568 | -0.559 |
EccD1_KO | 0.224 | 1.079 |
EspI_KO | -0.821 | 1.586 |
PE35_KO | 0.198 | -0.718 |
PPE68_KO | 0.269 | -1.357 |
glycerol2 | 0.349 | 1.684 |
lignocerate | 1.062 | 2.681 |
oleate | -0.38 | 0.829 |
phosphatidylcholine | 0.381 | 1.594 |
acetate | 0.667 | 3.812 |
glucAc | 1.062 | 3.156 |
Rv0950ko | 0.865 | 0.154 |
Rv1096ko | 0.986 | 1.852 |
Rv3684ko | -1.605 | 1.156 |
delta_otsA_trehalose | 3.188 | 0.329 |